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## Context:
In ancient DNA studies, a popular field is to recover ancient pathogen genomes (e.g. [Yersinia pestis](http://dx.doi.org/10.1016/j.cub.2017.10.025)), i.e. the genomes of dead organisms …
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Hi,
Is it on purpose that not all SNPs from the 1240K markers are included in the filters data that is used to restrict imputed SNPs to the 1240K marker set? At the hdf5 data import the imputed GTs…
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A program tesztelése, használat közben, a mai nap 2017.12.11.-én.
A tesztelésre 2 óra van kiadva.
Tesztelő neve: Kovács Dániel
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```
$ ms 3 1 -T -r 5 6 -seeds 1 2 3
ms 3 1 -T -r 5 6 -seeds 1 2 3
1 2 3
//
[2](2:0.293,(1:0.214,3:0.214):0.079);
[4](3:0.214,(1:0.077,2:0.077):0.138);
```
```
$ ms 3 1 -T -r 5 6 -seeds 1 2 …
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I just published the new [archive explorer](https://www.poseidon-adna.org/#/archive_explorer). Here are some ToDos for the future, ideally for @93Boy. Generally each of them deserves an own Pull Reque…
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Hello,
Thanks for the awesome software!
I wonder is there any way to measure imputation quality on a per-sample basis, from the output of GLIMPSE1? I already filtered out all variants with INFO…
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Hi!
I am trying to use PMDtools to generate damage plots. I have paired-end sequencing reads and have merged them. The issue is that I only observe the peak towards 3' but not the 5', and I suspect …
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Hello,
Let me first thank you for this great tool. I was wondering if there is any way I could obtain all invariant sites that are actually covered by the ddRAD reads in our final vcf file, somethin…
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```
Vegre kigondoltam, hogy hogyan nem lesz szerzoi jogi balhe abbol, hogy
hozzaferheto az alignment. Az UploadController hasheli az id es a szerzo
konkatenaciojat (tesztben eleg ehelyett az unobfusca…