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### Description of feature
Would it be possible to add support for Oxford Nanopore Technology reads? I've found two projects (the second integrating the first) that might allow a quick implementation…
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Hello, I'm running the following command in my terminal:
**fastp -i user/nanopore/inputs/ -o user/nanopore/outputs/ -A -G --qualified_quality_phred 10 --reads_to_process 5000 --thread 8**
Althou…
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Hello,
I am trying to run Donut Falls with the Unicycler assembler for some ONT and Illumina reads.
I am using the following run command:
`/Shared/SHL-BUG/software/nextflow/nextflow run UPHL-Bio…
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Hi,
I would like to extract plant mitochondrial reads from the whole genome Oxford Nanopore? Do you have any idea which software-related for this? Like GetOrganelle for Illumina reads.
Thank you.
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Hi
I have two sets of input data, one from Nanopore and the other from PacBio. Could you please advise on the ‘--data_type’ parameter? Should I choose ‘pacbio_ccs’ or ‘nanopore’? My goal is to obtain…
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Disable length trimming based on quality for NanoPore reads. NanoPore quality scores do not follow PHRED scores.
```
@2b89169b-74c9-4653-8877-c3f21ec7674d runid=2564fad3a9906330fcc0c6c90ac0c8128b8…
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Hi!
Is there a chance it will work with long reads like Nanopore or Pacbio?
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Hi! I input custom adapter using adapter.py, these adapters can be found if i use -o function for trimming
"30,139 / 32,299 reads had adapters trimmed from their end (2,444,748 bp removed)"
but …
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Hi! We have sequenced some isolates of _Candida auris_ and would like to perform de novo assembly. May we ask is it possible to add support for Nanopore reads?
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Can AlignGraph2 support nanopore reads?