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Hello,thanks for the beautiful implementation of dtw!
I'm facing an issue when using this code.
At first, I want to output the alignments of two sequences.
Therefore, I change the output of for…
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Hi authors, great paper just a couple of nitpicks in the paper that might make it a little clearer.
1.
To use it you have to provide a set of contigs resulting of a de novo transcriptome assembly…
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The testsuite crashes on sparc64 with a "Bus error" which is usually an indicator for unaligned access:
```
diamond v2.1.9.163 (C) Max Planck Society for the Advancement of Science, Benjamin Buchf…
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Hi!
I'm having problems when I run the "emu abundance" with the "--output-unclassified". This is the code I used and the resulting error:
`emu abundance FL005_16S23S_S01.fasta --db MIrROR_DB/ -…
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can anyone tell me what should be the feature of bam file which i want to use as an input? i will be very thankful
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Hi Vince, thank you for putting together this software. I think it will be very useful for a lot of people.
I tried Scythe out on a test case, and I found that, for the most part, things behaved a…
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Hi
I've noticed that GraphAligner breaks up an alignment to a path of nodes in a graph into multiple segments when the orientation of a node changes along the path.
I'm trying to align long reads…
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Hi there,
Thank youf or this tool, but I am still facing the same issues as a lot of time ago.
My ATACseqQC version is 1.22.0
I am on windows 11
R=4.2.2
bioconductor=3.16.0
Am I missing someth…
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I'd like to ask if it would be possible to support the alignment of DNA sequences using the C API? I would like to integrate `block-aligner` into an existing C/C++ tool but cannot use the exisiting C …
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Hello! I am trying to use dotPlotly to compare a PacBio long read de novo assembly (produced with PacBio's assembler IPA) to a reference genome to visualize structural variations. I aligned the assemb…