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**Still working on this**
In this issue I will compile terms for inclusion (either imported or newly created) in VIDO pertaining to immune responses. I also suggest viral immune response specific axi…
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Hello! This tool is excellent. Currently, I have a set of regular RNA-seq sequencing data, and I would like to know if it can be used to analyze such data. thank you
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**Update:6/19**: So, looking over the Cell Ontology, we could just go through the terms that it imports from GO, including GO:_immune system process_ and the many subclasses descending from this term,…
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## 🚀 Feature
We would really appreciate it if you could add the rabbit OryctolagusCuniculus as a supported species. Specifically, we need the following ".gene": rabbit TRA, TRB, TRG, TRD.
## Mot…
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Dear developers,
Congratulations on cellphonedb v5! I love the fact that this version includes the "classification" and "directionality" metadata.
I was wondering, in the interactions where DPP4…
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This is an nfcore module for Partis: an HMM-based framework for B- and T-cell receptor sequence annotation, simulation, clonal family and germline inference, and affinity prediction. It is built on to…
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There are many issues with the classification of terms highlighted in the image below:
(drawn with OAK and `cl viz -p i --down CL:0000490 CL:0000749 "OFF-bipolar cell" CL:0000573`)
- why is …
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Dear all,
This issue compiles all the diseases from the unpublished USIDNET 2024 list for which MONDO codes have not yet been identified:
- The diseases listed below correspond to those marked in …
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The proposal has been made to obsolete terms with the pattern 'signaling involved in x', see https://github.com/geneontology/go-ontology/issues/25766
Note that it is possible that some terms here a…
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While evaluating results for ASM ([ci / 8/17](https://ui.ci.transltr.io/results?l=Aggressive%20Systemic%20Mastocytosis&i=MONDO:0020333&t=0&q=a14b1302-5384-4ec1-a691-d94a751879f9))
Result: Isoniazid…
IritR updated
19 hours ago