-
I would like to compute mappability of long reads on a repetitive plant genome to evaluate the efficiency of long reads (Pacbio or ONT)
Can I use large values like `K 1000 E 150` on a genome of 1GB o…
-
Hello,
Is it possible to construct the metabolic network diagrams at taxonomic levels other than phylum? Such as order, family etc?
Thank you,
Sarha
-
I have 200 metagenomes extracted from stream biofilms. I binned contigs to obtain MAGs and I dereplicated MAGs obtained in all samples to obtain a final pool of MAGs. Finally I mapped reads from each …
-
[this](https://www.youtube.com/watch?v=mvbyRdRRb7o) is a talk Shi Zhengli (batwoman, head researcher at the lab) gave in June 2018. not sure what it can be used to substantiate but it is indeed very i…
ghost updated
4 years ago
-
Dear SqueezeMeta developers,
I know this issue I open it's more focused in a non totally SqueezeMeta related issue, but I would like to know your suggestions, if possible.
I launched SM in se…
-
Beginning with sequence-based searches of the literature via PaperBLAST and using the sequences acquired from PomBase, UniProtKB
-
-
gefunden wurden Steel, Lead Ingot, Dark steel
-
Hi,
I am building a pangenome of 7 genomes and trying to see the impact of identity thresholds on the pangenome estimations. When I run ggCaller with the following command:
ggcaller --refs input.t…
-
Hi All!
I would like to know how the phylogenetic tree is built. The only information provided is that the presence and absence of genes is used.
So .. the phylogenetic tree is built by aligning t…