-
Nice resource!
Any plans on giving it an update with AllTheBacteria ? (an additional 1,271,428 new assemblies)
[AllTheBacteria - all bacterial genomes assembled, available and searchable](https:/…
-
# Issue Report
## Please describe the issue:
I am working on epigenetic analysis for bacterial samples using Oxford Nanopore sequencing (FLO-MIN114), and I’m transitioning from Tombo to Dorado for…
-
Hello,
I built a custom bacterial database following the instructions from the kraken2 manual on github (https://github.com/DerrickWood/kraken2/blob/master/docs/MANUAL.markdown). This went successf…
-
Hi. I attemps to identify the viral entities from a group of the bacterial and archaeal genomes deposited in GTDB.
Identification of viral sequences from GTDB using Genomad exhibited lots of viral …
-
**Is your request related to a specific disease? Please describe.**
'common cold' (DOID:10459) and 'scarlet fever' (DOID:8596) are not properly classified in the infectious disease branch (should be …
-
Hi, I'm trying to sequencing the genome of a bacteria. I have the PacBio assembly that consists of one contig (I have another but it's for the plasmid); so, what I need is to circularize this sequence…
-
The bacterial genome collection, downloaded from [the Zenodo's ProPhyle source data](https://zenodo.org/record/1054426/files/bacteria.tar.gz), contains some archaeal genomes.
For example, accessio…
-
Hello,
Thank you for publishing this great tool.
I am having trouble with extracting the downloaded Bacterial DB .xz file provided and getting this error:
"xz: (stdin): File format not recogni…
-
Project Lead:
Fatma Omar
--
Github username: @Fatma366
Team Member(s):
Adolf Oyesigye Mukama
--
Github username: @adolfmukama
Mentor:
Sebastián Ayala Ruano
--
…
-
**Wrong taxonomy: Homonymous bacterial and ciliate genera conflated**
The bacterial genus Membranicola Li et al., 2016 (GBIF taxonID 9707714) is wrongly placed under Tintinnidae, a family of ciliates…