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Hello all,
I would like to know if whippet is adapted for long reads and if anyone has already used it on Nanopore long read RNA-seq
Thank you for your reply
Best
Oliver
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Hello,
I am trying to run Donut Falls with the Unicycler assembler for some ONT and Illumina reads.
I am using the following run command:
`/Shared/SHL-BUG/software/nextflow/nextflow run UPHL-Bio…
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Hi!
I'm trying to assemble a mitogenome of Panax notoginseng(SRR16979610) but encountered a problem that I don't know how to solve. Any help in troubleshooting would be greatly appreciated.
The …
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Hello Dr.Chen,
I'm wondering if the ERVcaller could be used to input long-read sequencing? ( ..and any suggestion about how to adjust command parameters and any validation result of identification …
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Hi
Thanks for a great method.
I'm working on chromosome contact data generated from a long read sequencing method. Check link here if interested:
https://www.biorxiv.org/content/10.1101/833590v1…
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Can DaPars be used on long reads such as that from nanopore sequencing
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long read sequencing: nanoplot
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Hi,
Thanks for the amazing tool. I already have per-site methylation calling results from long-read sequencing in BED format with chromosome, start position, end position, and methylation frequency f…
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Hi,
is it possible to modify the tool to allow users to change the flag of flyes' nano-hq to nano-raw?
Thanks,
Joao
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This reads won't have quality. This may be useful for some long-read sequencing technology.