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Is there a way to import the results from [MAPseq](https://github.com/jfmrod/MAPseq)?
Here is some example output:
```
# mapseq v1.2.6 (Mar 24 2020)
#query dbhit bitscore identity matches mismat…
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After I updated the portal, I selected randomly this wikipedia link to test tree extraction from a web link workflow
https://en.wikipedia.org/wiki/Red_lionfish
The extracting name service return…
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Ask GBIF if those are useful for the backbone and ask UNITE if having at least a kingdom is possible
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Dear all,
The proposal has been made to REORGANIZE respiratory chain complex terms to obsolete terms that specify a specific cellular location (e.g. plasma membrane, mitochondrion) and replace them…
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Hello,
I'm trying to get guide RNAs out of CasOligo. In Supplemental file Figure S4 several guide RNAs are listed. Is it possible to get the sequence of these guide RNAs from CasOligo? For examp…
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Can we use the table to extract these?
Many HOM:0000007s will be synapomorphies both the clade in the taxon field. But not all?
It's not totally clear from the guidelines if it's valid to make a con…
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As per Guojing Cong:
> I noticed some of the golden standard ids are not in the graph, for example, 'HP:0025668'
I had expected all nodes with these gold standard phenotype vs. phenotype equiva…
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[https://pax-db.org/api/proxy/protein/7955.ENSDARG00000060911/ortholog_groups](https://pax-db.org/api/proxy/protein/7955.ENSDARG00000060911/ortholog_groups):
stops at chordates, but there're more S…
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Is there a way to use pyensembl for some of the other genome databases built with ensembl's code? Examples are all the sites hosted under http://ensemblgenomes.org/:
- Ensembl Bacteria
- Ensembl Fung…
xguse updated
9 years ago
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Hi fbreitwieser ,The web site https://fbreitwieser.shinyapps.io/pavian/ can not support krakenuniq --report-file .Or i missed something. The formats are as follows.
% reads taxReads kmers dup cov t…