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I just went over the Burgers' equation chapter again and made many corrections (see https://github.com/clawpack/riemann_book/pull/192/commits/204d29ca41f4560771f29f4c82d6f4571ffa7491). There were som…
ketch updated
5 years ago
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I re-installed sourcetracker2 to use the new, added feature --per_sink_feature_assignments and get the following error:
Error: no such option: --per_sink_feature_assignments
This feature was added: …
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this is my command:
`seqtab.nochimPerSimple Warning messages:
> 1: In doTryCatch(return(expr), name, parentenv, handler) :
> restarting interrupted promise evaluation
> 2: In doTryCatch(return(…
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Hi,
I want to use metontiime in order to prepare the 16s reads from nanoporre to analysis in qiime 2 ( The final goal is to receive alpha and beta diversity and analysis of qiime 2 and not only the a…
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> Should we add a rarefaction curve?
@jessicaday Do you mean somethin like this -> [rarefaction.pdf](https://github.com/Gibbons-Lab/aquaponics/files/2470969/rarefaction.pdf)?
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We would like to discuss how best to correct richness/alpha diversity for differences in sequencing depth (total amplicons) when using the default dada2 pipeline, i.e. when using dada(, pooled = FALSE…
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**Improvement Description**
In the `summarize` viz, display information about number of samples in a given category. This should include total samples in category, and the number of samples at a give…
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It's better to ratify all samples to same sequencing depth right before clustering!
Just a small detail, but let's try to get this perfect! = )
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**Improvement Description**
@nbokulich and @thermokarst and I were discussing an alternative to the moving pictures tutorial for an upcoming QIIME 2 workshop in June. The goal would be have something…
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Hello @zachary-foster
I attended your Phytobiome Conference in Montpellier last year. I manage now to analyze my data with Metacoder package. I am working on the rice microbiome, I'm looking the mi…