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### Subject
[Build] for compilation-related issues.
### Describe the bug
While trying install ORFS with `--local` failed during yosys installation.
### Expected Behavior
Complete ORF…
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Error in hclust(d = dist(x = fegenie.scaled)) :
NA/NaN/Inf in foreign function call (arg 10)
Calls: as.dendrogram -> hclust
Execution halted
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Hello! I'm trying to install MetAMOS on my system, but having a bit of trouble. I've run the following commands, which completed without incident:
`python INSTALL.py core`
`python INSTALL.py optio…
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Hi,
I recently annotated phages with phanotate in an environment where tRNAscan-SE was installed. Therefore, tRNA masking did use tRNAscan-SE. However, in my final NCBI submission I also added tRNA p…
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Hi,
I have a project which I recently exported using sqm2zip and I'm trying to load into R, but whether I use the zip file or the original project folder I get this:
Proj1
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Do you recommend any tool to annotate 5'UTR, CDS, 3UTR features in the isoforms generated from `FLAIR`
akk01 updated
2 years ago
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In https://github.com/The-OpenROAD-Project/bazel-orfs?tab=readme-ov-file#requirements the link https://github.com/The-OpenROAD-Project/bazel-orfs/blob/main/MODULE.bzl should be https://github.com/The-…
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I've been using vsearch a lot recently to group sequences with `--cluster_fast`. In my specific case, I've been ending up with many singletons (10,000s at a time) that get output in the same way as ac…
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### Description of feature
Originating from e.g. metatdenovo and mag pipelines. This would be very helpful for me as I run those pipelines and would like to keep the ORF ids for all analyses.
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Dear Zebulun,
I am trying to learn how to use fagin with the yeast dataset. However, after download the data, running ```make run-yeast``` resulted in error message. Is there a vignette for running t…