-
Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/Seven595/ADM
Confirm the following by editing eac…
-
(from @vjcitn) The BiocParallel vignette mentions foreach support and DoParParam ... but for package authors the steps of makeCluster, registerDo* and stopCluster the vignette should indicate what a *…
-
Hello,
I am currently working with a reasonably large dataset of EPIC v1 and v2 arrays (> 100 samples) with my institution's compute cluster, which is slurm-based. The issue that I am running i…
-
```
# Runs fine, takes just a few seconds
fgseaRes
-
- Not actually working on this right now (I promise) just adding the issue so that it stays on my radar
- Need to meet the [BioConductor package guidelines](https://bioconductor.org/packages/release…
-
Hello. This tool seems very useful.
To run this for multiple samples integrated into one object, which way (harmony, seurat integration etc,) are compatible and which is the first should be done, da…
-
Hello,
I used MS-GF+ on the mzML file, using the .faa file as reference, and produce the .mzid file. All files are in the following link: https://figshare.com/s/b65fc594da19f0f9347f . The raw dat…
-
The hook checking for conflicts allowed me to push this commit, including a conflict surrounding version number
```
~/b/BiocParallel master$ git show 205e71b651f4c0bf92db5b12c7c64b06b8b4db2b DESCRIP…
-
How do you specify the `BPPARAM` argument to make `mmDS` to run parallel? The default is set as `BPPARAM = SerialParam(progressbar = verbose)` which means it going to run serial right? And when I run …
-
Using `BiocParallel`. New signature should be
``` r
setMethod("mapToGenome", c("Proteins", "GRangesList"),
function(x, genome, drop.empty.ranges = TRUE, ..., BPPARM))
```