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Is there a current plan to include other microorganisms like fungi?
It would most probably involve other tools and databases, but at least for the assembly, spades could work, too.
Is there a wa…
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This is related to issue #189 raised earlier.
My student Vladislav and I are using charcoal to decontaminate draft genome assemblies of nematodes. charcoal is wondrously efficient at ridding such …
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Hi fbreitwieser ,The web site https://fbreitwieser.shinyapps.io/pavian/ can not support krakenuniq --report-file .Or i missed something. The formats are as follows.
% reads taxReads kmers dup cov t…
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I know busco is run as part of dammit but it doesn't seem like busco completeness evaluation is available anywhere.
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Dear developers,
Thank you for the wonderful tool. I used GLABA to predict genes in my species, and I found a potential error in GTF produced by GALBA. Please see example below.
Is the gene "g198.…
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I used "trinotate_report_summary.pl" to generate a "cXp_summary.html" file, however, this html file shows up blank when opened in Google Chrome or Firefox.
Why?
and, here are the contents of the…
ljyls updated
3 years ago
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### Prerequisites
+ [X] Have you read [Feedback](https://guangchuangyu.github.io/ggtree/#feedback) and follow the [guide](https://guangchuangyu.github.io/2016/07/how-to-bug-author/)?
* [X] make s…
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Hello,
I have encountered the followinf error:
more SHADDVT3_asm_bp_hap1_p_ctg/run_blobtools_create.log
Reading all TSV files in ../window_stats
Traceback (most recent call last):
File "/s…
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arw36 updated
3 years ago
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Hi Ren-Gang,
This issue may partially overlap with previous questions, but I think it will help if it shows up separately here.
Is there any progress/updates on allocating animal LTR-RTs into li…