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The Vaccine Ontology (VO) is a community-based biomedical ontology in the domain of vaccine and vaccination. VO systematically standardizes and integrates various vaccines, vaccine components, vaccine…
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Sorry if there's already functionality like this in ontobio:
Use case is generating a new Panther slim from an Ontology object. We first load the whole GO, run some heuristic to select what terms w…
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I've been pushing to include more relations into the Relation Ontology that correspond to various post-translational modifications (e.g., phosphorylates, ubiquitinates, myrisotlyates).
I began cura…
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## We have multiple _potential_ use cases for recording causal relationships between phenotypes:
* Defining phenotypes that specify aetiology - e.g. hemolytic anemia MP:0001585 DEF: deficiency of …
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I'm having a problem with the owl:imports directives in the current version of master (commit a9e8c72e), I'm using Protege 5.5. When it loads ExtendedRelationOntology.ttl, it processes the imports dir…
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As a software code can be also published and have authors as well as other properties and relations, which are typical for a publication, I would propose either to create a new class :SoftwareCode, wh…
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Extract any relevant metrics that can be automated into a candidate list of
automatable metrics as a pre-step for our review process.
BioPortal shows: #classes, #individuals, #properties, max …
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Currently RO has the term "contributes to condition" which is a parent of:
- contributes to frequency of disease
- contributes to severity of condition
- ameliorates condition
- exacerbate…
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_From [zhengj2...@gmail.com](https://code.google.com/u/100840849128868144328/) on August 27, 2013 13:03:42_
http://purl.obolibrary.org/obo/IAO_0000600 was used by two terms:
1. Class: predict value
2…
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'cell population proliferation' was going to be made 'do not annotate', but the thinking was that it would be okay to keep the term, but annotations must have an extension:
https://github.com/geneo…