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While running Fast-Plast the run stops with a spades-related issue.
Any suggestion to fix the issue?
thanks!
Use of uninitialized value $total_length in division (/) at /home/jorge/Fast-Plast/bin…
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3C04AAF2C775535889AE7248CF9F
![image](https://github.com/EdwardPiwowar/BBA/assets/10560652/5509458d-882e-4a38-8bd1-c5c13b029d99)
BTW: 1H-(P)-2C-(P)-3D is in GIB defined as 5-5 and not splinter
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### Description of the bug
Bioconda recipe currently broken for SPAdes 3.15.5, updated to 4.0.0 is reported to fix the issue. Discussed on slack in this thread: https://nfcore.slack.com/archives/CE9M…
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from #644
0120039B805DCE36776472803608
![image](https://github.com/user-attachments/assets/b1e9d864-7b3e-4066-aeda-2d3d492af773)
I don't understand the 4N.
If playing 2/1 just bidding 2S is a s…
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I'm using a plugin on my server that utilizes vindicators, and in the process of that, I've discovered that mobs with weapons (ie: mob with iron axe attacking player) are dealing a LOT more damage tha…
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**Workflow Name**
Metagenome Assembly
**Project URL**
https://nmdc-edge.org/admin/project?code=brFrthQj2C3PyUvj
**Additional Info**
```
' 0:00:07.478 34M / 579M INFO General …
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Is there any way to not to use the label_img and just to make image to image translation with SPADE? Pix2pixHD has option -label_nc 0, but it is no avaliable here, cuases error. I mean paired aligned …
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### Description of bug
Greetings!
Thank you for the amazing tool. I am having trouble in assembling shotgun metagenomic raw reads of some of the samples. I am not sure what underlying issue is and h…
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https://github.com/rrwick/Unicycler/blob/69e712eb95c4b9f8a46aade467260260a9ce7a91/unicycler/spades_func.py#L226
```
command = [spades_path, '-o', spades_dir, '-k', kmer_string, '--threads', str(…
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Hi all,
I'm using paired-end assembly on GAGE-b MiSeq dataset. (--pe-1 r1.fastq --p2-2 r2.fastq)
In the log file, I found "**Skipping processing of scaffolds (empty file)**" and the output there…