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### Description of bug
When I try to run spades.py --test or any other spades script, I get the following error:
```
== Warning == No assembly mode was specified! If you intend to assemble high-…
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I'm [creating a Tripal module](https://github.com/NAL-i5K/tripal_eutils) that imports NCBI XML and creates chado records, as well as linked records.
I think it would be neat to have a recommended, …
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- [x] I am on the [latest](https://github.com/python-poetry/poetry/releases/latest) Poetry version.
- [x] I have searched the [issues](https://github.com/python-poetry/poetry/issues) of this repo and…
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Dear Zach,
Thank you very much for your packages!
I’m currently working on constructing a gut microbiota ecological network for a specific species using Spiec-Easi. I have 10 samples, and I retain…
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A good starting point is Pfam_SARS. I reviewed it a few weeks ago, and IIRC it has pretty good coverage of Betacov genes, but doesn't include some of the genes towards the 3' end found in other genera…
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Hello,
Recently we have been using hybpiper to assemble thousands of BUSCO single-copy genes from metagenomic reads (2x150bp). The target file is amino acids, and we set the coverage cutoff for spa…
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I seem to be getting an error towards the end of the LAVEnder evaluation (just producing a simple report, via a Snakefile exactly as specified in the tutorial/examples). It does produce the individual…
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Hi Carlos,
First off, thank you so much for putting in all of the work to develop this tool. I have been looking for something similar to this for years and I finally need to publish some papers …
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### Description of the bug
I encountered an error while running the EBIMETAGENOMICS_METTANNOTATOR pipeline. The process EBIMETAGENOMICS_METTANNOTATOR:METTANNOTATOR:UNIFIRE (BA_CL3) terminated with an…
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