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Hi,
Thanks for the great tool on nanopore data assembly benchmark. I ran a dataset and it failed on mulitqc step which compliant about the tempate invalid.
```
Error: Invalid value for "-t" /…
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### Context
We are using [MultiQC](http://multiqc.info) to generate QC reports for the RNA-seq pipeline (#205). MultiQC generates HTML files (example [here](https://github.com/AlexsLemonade/refineb…
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Dear,
I am facing a problem using the docker image. Can you help me?
I use this command:
docker run -v $(pwd)/Samples:/msPIPE/data:ro -v $(pwd)/ReUsableDatabase:/msPIPE/reference -v $(pwd)/Work…
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It would be good to add MultiQC as an optional step:
* **Main Website:** https://multiqc.info/
* **GitHub Repo:** https://github.com/ewels/MultiQC
* **Documentation:** https://multiqc.info/docs/
…
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**Snakemake version**
7.24
**Describe the bug**
In params, I have the following line to specify that the config file for multiqc is in the following location (which is specified relative to whe…
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Thanks for the awesome tool!
This is more a feature request - if the goal is to have a better/faster version of BUSCO, it would be helpful if the outputs were also direct drop ins. For example, it …
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Hi there,
Depsy doesn't seem to be able to find MultiQC, a package on PyPI.
https://pypi.python.org/pypi/multiqc
https://www.github.com/ewels/MultiQC
http://multiqc.info/
I tried fudging a url with…
ewels updated
7 years ago
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Depends on this working: https://github.com/ewels/MultiQC/pull/1111
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gitpod /workspace/dp_tools (metrics_extraction_subfeature) $ python download_multiqc_from_OSD.py --osd-id --output-dir multiQC_output_ASB
Usage: download_multiqc_from_OSD.py [OPTIONS]
Try 'download_…
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There is a new version of nf-core/bacass: [v2.3.0](https://github.com/nf-core/bacass/releases/tag/2.3.0). This version includes the integration of KmerFinder and custom MultiQC. The remaining tasks ar…