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Ling, as it is.
Is fairly terrible.
It's a stealth-based transformation antagonist with no reason to transform and hilariously overpowered abilities.
It's not even supposed to absorb people seeing …
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I am having some issues with the output of my centrifuge runs.
1) For instance in my kreport, if you add the number of unclassified reads and the root, they will not add up to the total number of i…
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Hi, I am using Canu 1.6 to assemble two closely related bacterial genome of 2.5mb from nanopore whole genome sequencing. However, I was able to get a close and circularized for one genome but not the …
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I recently downloaded all genomes available on ncbi in hopes of making a database that would be as comprehensive as possible for determining taxonomy for a largely unknown eukaryote/prokaryote metagen…
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I ran spades 3.10 as following:
`SPAdes-3.10.0-Linux/bin/spades.py -t 10 -k21,31,51,71 -o spadeswref --trusted-contigs ./virusgt1.fasta -s Hepacivirus.s.fastq --iontorrent`
The longest contig I g…
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Issue to track the progress on the [Roadmap](https://github.com/HadrienG/InSilicoSeq/issues/1) item "The user chooses nothing, and random genomes from RefSeq genomes are selected"
- [x] add new 're…
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Just curious about this. Vicuna is a virus genome aware assembler, while Trinity - as described by its developers - is an RNA assembler. What is the rationale of this choice?
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I propose to change all instances of 'protein clusters' in our pangenomic workflow with 'gene clusters'.
## Summary of the discussions so far
_I will keep this section up-to-date, the original i…
meren updated
6 years ago
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I want to sketch my fasta file, but it have error massage by ERROR: reading filename.fasta.
Can't I use fasta file? Or orther reason?
(I use **./mash sketch -s 1000 -k 17 filename.fasta** and **./ma…
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Hello,
These may not be issues so much as questions. Firstly, I am currently training a large database of genomes (20713), consisting of 691 Archaea, 12732 Bacteria, 1048 Fungi, 273 Protozoa, and 5…