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Hi,
Is there a way of getting BandageNG to output connected components as separate assembly graphs? I work with metagenomes and it would be extremely useful to be able to do this and then work on t…
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Thank you for the great tool! I am using MEGAHIT+VIBRANT+COBRA to get about 35 high-quality phages from each of my metagenomes after validation by CheckV. I just tested the new overlap-based assembler…
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Could i use gfase for gfa of Flye (HERRO corrected ul-ONT reads)?
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Originally by @vruano
Currently the dangling head and tail recovery algorithm only handle simple paths without furcations from the dangling source/sink vertex and the reference path.
However some …
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Hi @chbe-helix，
I hope this find you well.
When trying to repeat the tutorial HLA typing results with ILMN/NA12892 sample, I got the outputfile named "assembly_graph-hla.NA12892_extracted_1_fq…
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### Platform
ESP8266
### Assembly
I did the assebly by myself
### nRF24L01+ Module
_No response_
### Antenna
circuit board
### Power Stabilization
Elko (~100uF)
### Conne…
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Hi there,
I am using Hifiasm (version 0.19.7-r598) to assemble a plant genome (2n=28) with HiFi and Hi-C data.
First, assuming it’s a diploid plant, so I run with command: `hifiasm -o OS010681.a…
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Hi
I am running the assembly using metaspades. Below the final lines from the log, I don't see any error. I am getting an empty file for the final_assembly.fasta. Which file should correspond to thi…
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An error occurs when assembling *asm.p_utg.gfa using hifiasm output, but it is normal in *asm.p_ctg.gfa. GetOrganelle is installed by conda v1.7.7.0. The command is `get_organelle_from_assembly.py -t …