-
Hello,
I've been a big fan of TElocal, especially for its clear definitions of complicated TE system. As someone from other fields, I always feel some sort of disconnection between mainstream TE re…
-
Hi
I recently found your manuscript and simGBS. I was looking for a GBS read simulator because I wanted to simulate GBS data from polyploids. I.e., take different genomes, simulate reads, mix them,…
-
Hi folks! I'm Nicole! I'm just starting my first year in the Genome Science and Technology Masters Program. I'm working in the Ziels lab in the Civil Engineering department looking at microplastics in…
-
If you run `stag classify_genome` on a small fasta file, I get:
```
Unzip the database
('COG0012', '5490')
('COG0016', '6345')
('COG0018', '9315')
('COG0172', '7155')
('COG0215', '10530')
('CO…
-
-
```shell
poetry run linkml-sqldb dump \
--db data_7.db \
--target-class Database \
--schema src/schema/nmdc.yaml data_7.json
```
-
# 1. 可能是 ATAC-seq 方法的原始文献 (nature methods, 2023)
https://www.nature.com/articles/nmeth.2688
Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-bi…
-
Hi,
I am just starting to do some RNA Velocity analysis and it's been working so far, but I have one strange issue and I was wondering if you can see what's wrong.
I am working on the 10x Genomics…
-
Hello RGT,
Thanks for developing this amazing package.
I met the error `KeyError: "sequence 'chr22' not present"` when following the full-site test tutorial here (http://www.regulatory-genomics.org/…
-
Hello I'm writting because I'm facing when I run RepeatModeler.
Here is the code I used :
```
Sp_name=Tryphoninae_B
ASSEMBLY=/beegfs/data/these/Genomes/Tryphoninae_B/Tryphoninae_B.fa
c…