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Hi Bernat,
Thank you for the great tool. I would like to create the karyotype for a new rat genome mRatBN7.2/rn7 - NCBI released Nov 2020 but UCSC just recently: http://hgdownload.soe.ucsc.edu/gold…
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Can we use Circlator for polished single contig?
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We would like to do some simulations with a separate plasmid and/or genome in a cell that is being infected by the phage. Is this possible already? (Can you call `register_genome()` twice and it will …
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I got an error when using —— setGenome("hg19") :
Configure bsgenome ...
Configure bsgenome finished
Configure motifpwm ...
Configure motifpwm finished
Configure motifPWMOBJ ...
Configure motifPW…
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I'm trying to download the refseq representative genome for ``Vibrio lentus`` as it is listed here
https://www.ncbi.nlm.nih.gov/genome/?term=vibrio+lentus%5Borgn%5D
and it also has the coresponding …
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Hi,
I have a very naive question.
I performed genome assembly using nanopore long reads (assembly using canu).
Should I run circlator after canu (canu + circlator + nanopolish) , or performed a pol…
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Hi, I am working with genomes of two co-infecting similar species as foreground and background genomes. So far I have not successfully obtained any primer sets at all, even after adjusting some of the…
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Hi @mikolmogorov,
Thanks a lot for creating such a great tool!
I am new to the genome assembly field. Could you provide some information regarding the relationship between phase block (phased_bloc…