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MSID: 97507
Version: 2
Preprint DOI: https://doi.org/10.1101/2024.04.24.590938
## Step 1. Awaiting reviews
**Editorial to post reviews via hypothesis**
**Useful links:**
- DocMap: https://data-hu…
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I am having some questions about the `enrichGO` function, and its comparability with the results obtained from the `topGO` package. I'd appreciate if someone can comment on my questions, I think this …
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Hi!
The current SAM specification of the MM tag says:
> Following the base modification codes is an optional ‘.’ or ‘?’ describing how skipped seq bases of the stated base type should be inter…
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Hi FelixKrueger,
I am little confused about the number of detected Cytosine in `CX_report.txt` and `bismark.cov.gz.`
With the option `--CX`, the coverage file (`bismark.cov.gz.`) is extended t…
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Preferred Term: m6A-MTase sequencing assay
Synonyms: Fiber-seq
Definition: A DNA methylation profiling assay in which chromatin stencils are created by treating nuclei with m6A methyltransferase (MT…
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running this
```
bedtools unionbedg -i
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Hi,
I've tried MOFA with several datatypes, some having ~50 samples while others have 15 or 22 samples.
Here's an overview of the data:
 as part of `rnb.run.import()` as both a data.frame (specified …
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### Contact Details
_No response_
### Scripts
03e-methylation_adjustment2.sh
### What happened?
Some cohorts reported all methylation PCs are genetic PCs so 03d script failed.
### How can the bu…
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In organizing data, we have come across two samples provided by @ksil91-
and subjected to bisulfite seq.
NF2_6
NF2_18
details at:
http://onsnetwork.org/kubu4/2015/12/18/bisulfite-treatment-oly-recip…
sr320 updated
8 years ago