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### Description of feature
https://github.com/esteinig/nanoq
Ultra-fast quality control and summary reports for nanopore reads
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conda is leveraged for installing (some) dependencies (at least, the recommended install method), but conda is not fully leveraged via a bioconda recipe for installing scNanoGPS.
Are there plans on…
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Hi Gaetan,
Hope you've doing well since EBAME, I'm happy to see this tool gaining some attention.
I was wondering if you've formalized the maximum error rate tolerable by metaMDBG to function b…
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Hi all. I'm trying to polish an assembly from Flye for nanopore reads. However, I cannot make the command work as I receive errors that I cannot determine the source, or how to proceed. These errors a…
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Does `tigmint-make tigmint-long` support FASTQ reads from other platforms than 10x genomics chromium?
```
$ bash -x tigmint.sh SCRATCH=/scratch/mmokrejs/job_3024675.cerit-pbs.cerit-sc.cz TMPDIR=/s…
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Hello,
Would be possible to perform a SNP variant calling using Nanopore sequencing data? What parameters would have to be modified and how could a custom error model based on Nanopore be created?…
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Hi，
I am trying to run eventalign on reads from RNA004 and I get the following error:
[meth_main::13.631*0.41] 0 Entries (0.0M bases) loaded
[pthread_processor::13.631*0.41] 0 Entries (0.0M bases…
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Hi Raymond,
Thanks so much for providing this tool. It worked great.
I was wondering if the same could be done for long reads, more specifically Oxford Nanopore?
Thanks :)
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```
0:00:00.000 4M / 4M INFO General (main.cpp : 76) Loading config from /scratch/mygenome__SPAdes3.11.1_noecc_ramdisk/K55/configs/config.info
0:00:…