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How is a classification problem, as discussed in the data mining paper, different from a clustering problem?
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Hello, I am trying to generate the input for SIGNALS using hmmcopy and counthaps; we have single-end data and we have realized that our data doesn't work with your software, specifically for the count…
shngk updated
2 months ago
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Hi,
This is not an issue report, but I would like to share my workflow for visualizing FastANI results as I think it will be useful for other users.
### 1. Visualize all-vs-all ANI matrix
I …
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Thanks for your wonderful tool !
My problem is
1. if there are the parameters related with the alignment coverage.
For example,
![微信图片_20200218223602](https://user-images.githubusercontent.co…
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Hello dear author,
I used this package for my scRNA-seq data analysis, now I wonder if I can use the function "BuildSNNGraph" on my DNA methylome data (data frame: genome_bin * cell_ID)? My purpose…
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I would like to be able to run cascaded clustering with explicitly defined sensitivity levels, and also disable the first Linclust step. Can this be done somehow?
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- [ ] 1. Salmon/sleuth (Prereq: familiarity with HPC, bash and R)
- [x] 2. SRA/GEO data download (Prereq: familiarity with HPC and bash)
- [ ] 3. Sequence data QC (fastqc, multiqc, qualimap) (Prereq…
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sorry to trouble you. In a paper, I saw someone use your software(starcode)to cluster sequences within 1nt mismatch. the following is the paper title and description:
title:Single-cell profiling of t…
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Dear developers of sei,
First, thank you for developing this amazing tool.
I am doing variant effect prediction with sei and come up with this question.
Apart from the seqclass that is being aff…