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Generate JSON Mapper for a pleiotropy chart like the ones on the landing pages for the phenotypes
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ncbi, resfinder, card all use diff names
maybe use 3 letter codes? like FUS, KAN, VAN etc
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See appendix in https://docs.google.com/document/d/1e77a7dZ9I1FcXHbK-CXkbXmP5xywsw1dePsoxX_E6OM/edit?ts=5abd358b
65pheno
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this page won't load:
http://stage-monarch.monarchinitiative.org/phenotype/FBbt:00004326PHENOTYPE
which was from the phenotypes listed on this page:
http://stage-monarch.monarchinitiative.org/gene/NC…
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I seem to recall we have had some discussions before about integrating the similarity score into browse portion of the app. However, I don't see any tickets open regarding this. I think it is somewhat…
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It is not clear what it means or should mean that certain diseases can be selected (eg. Dementia), but that certain others can not be selected (eg. Charcot-Marie...).
Moreover, what the expected beh…
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* ethnicities: scrape names for generation from here, if nowhere better found:
* https://en.wikipedia.org/wiki/List_of_contemporary_ethnic_groups
* https://commons.wikimedia.org/wiki/Category:E…
dmarx updated
8 months ago
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not obvious how to represent this - could be measured as viability, cytokine levels, bacterial load.
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Things like the impact of a mutation on the affected protein's Molecular Function