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the STUDY (alias) should be the same for every assembly being uploaded to the same project. You will also need to generate a project.xml file which looks something like this:
```
E…
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Hi Sergey,
I just completed an assembly of the Rice genome with CCS/HiFi reads, running v.2.0a, and I used a single high-memory (1.5TB) node to do it. Now I'm trying to gauge what the *absolute* min…
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Dear Mikhail,
I have been running Flye on a plant genome which is around 2 Gbp in size. Flye reached the last step before polishing stage, and is taking some time to finish. It is running on a single…
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Thanks for this awesome tool. I successfully used it to assemble soil metagenomes using illumina and nanopore reads. However, I could not find what is the minimum size of the assembled contigs (set a…
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Usually, It's not difficult to choose genome size when perform single microbes assembly, 3M, 5M or 10M may be all okay.
But when do metagenome assembly, it's still obscure about how to choose the …
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Hi, and thank you for a great assembler!
I seem to have stumbled upon something trivial, but I can't figure out what the real problem is.
I'm trying to assemble 33 GB of paired + unpaired + merged…
spock updated
4 years ago
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```
Anvi'o version ...............................: esther (v6.1)
Profile DB version ...........................: 31
Contigs DB version ...........................: 14
Pan DB version .............…
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I am running the metagenomics snakemake workflow and even though I only have 8 metagenomes that I'm trying to assemble individually, it's trying to do some of the steps 9 times.
Here's a screensho…
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Hi Sam, I'm trying to test your pipeline on my 16S ONT data.
I'm facing an error and I don't know why. Here is the log file:
Wildcard constraints in inputs are ignored.
Wildcard constraints in…
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Just curious (because I see it in the log(s) all of the time) about SPAdes --meta flag for assembly of short read metagenomic data.
I wondered where to specify this flag and/or where to edit any …