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Dear BiocTeam,
I am investigating the proteome of human cancer samples and want to insert their genetic variations into the reference proteome fasta sequences to increase the sensitivity of my pept…
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I'm prepping to teach using this workshop and I've made a few minor changes so far, but I've come across a bigger one I wanted to discuss before unilaterally making the change...
At the end of the …
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Hello,
While packaging glmgampoi for Debian we noticed that the tests fail on 32bit x86
```
BEGIN TEST testthat.R
R version 4.0.3 (2020-10-10) -- "Bunny-Wunnies Freak Out"
Copyright (C) 20…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/CooperstoneLab/MS2extract
Confirm the following b…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/Yunuuuu/eheat
Confirm the following by editing ea…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/waldronlab/bugphyzz
Confirm the following by edit…
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This package is a parser to import HiC data into R, from several formats. Most of functions are extracted from our Bioconductor Package HiCDOC (already published). But this package can be cumbersome …
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I'd like to open an issue to map out ideas about the general workflow for the analysis. Please edit or comment if you have suggestions. A general goal is to move away from using Seurat, if possible, a…
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Hello,
I've noticed that cytomapper::measureObjects doesn't execute with multiple workers when the images are stored on disk. Only one CPU core seems to be utilized despite running the following li…
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A function to compute the [transitive reduction](https://en.wikipedia.org/wiki/Transitive_reduction) of a directed graph would be nice.
> a transitive reduction of a directed graph is a graph with …