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Hello, I am getting an error when running Canu with "useGrid=false" when there are multiple nodes on the cluster. The cluster uses the SLURM scheduler.
In #2114, you commented:
"As in other recen…
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I see that BRASS is used in the dockstore WGS pipeline, but it's not clear whether BRASS itself can be used on exome data for structural variant calling.
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Use the max number of csd alleles found in literature, use that value in SimParamBee class, and cite the source.
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### 路由地址
/oup/journals
### 完整路由地址
/oup/journals/:name
### 相关文档
https://docs.rsshub.app/journal.html#oxford-university-press
### 预期是什么?
can work
### 实际发生了什么?
I input `/oup/jo…
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Hi Simon,
I am running the `popgenWindows.py` on my `.geno` file with the following code. But I am getting some errors as followings:
`python /gxfs_home/cau/suaph275/genomics_general/popgenWindows…
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Hi, I'm running RNAseq for CML patients. However, the fusion.tsv and visualization pdf did not show the main fusion gene for CML (eg: BCR, ABL1 gene). I'm using GRCh38+GENCODE28 for annotation. Is thi…
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_(I'm creating a new issue instead of commenting under #361 because this affects information in multiple other issues.)_
In #361 the defining mutations for BA.1 and BA.2 are listed as a table. Both…
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**Describe the bug**
A study has a linked publication which is showing up in the Publications Module in projectLive-NF but not in the "Publication Status" section of the "Participating Studies" Modul…
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I have a few questions about these files
* Does the BNX file contain all the data necessary to create a truly complete Bionano optical genome mapping version of the CHM13 reference genome? Meaning wi…
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**Questions**
1) I have 61 samples, then could I get result from 61 samples? Specifically,
**is there a maximum sample number when running miRge3.0 ?**
The data size ranges from 700M to 1.2G …