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Trying to run natively with refgenie and hg38 assets installed and getting this error:
```
~/pepatac/pipelines/pepatac.py \
> -G hg38 \
> -I /wynton/home/reiter/gloeb/group/bulk_atac/211020_pri…
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Hi, I'm trying to run the flow via snakemake (snakemake --cores all --use-conda ) but I get this error.
https://raw.githubusercontent.com/akcorut/kGWASflow/v1.3.0/workflow/rules/common.smk:98: Sy…
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**Are you using the latest release?**
Yes.
**Describe the bug**
I am trying to annotate a very large genome (~28Gb!). Funannotate train is failing at the minimap2 step which, from running the iso…
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I try to use CONDA environment and manually install pasa, but in the manual installation, because it is a non root user, the software that pasa depends on is installed with CONDA, only the pasa softwa…
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Hi
I tried to scaffold my contig level genome with my hic data but failed with the segmentation fault error.
I think this error can be occurred due to the large hic alignment, which is about 700Gb…
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Good morning,
I'd like to perform the multiple genome alignments among 9 different genomes. For some reasons, I'm getting the same error as #114, which seems to appear when aligning many genomes (iss…
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Hello,
I am trying to run funannotate (version 1.7.4) through docker on a CentOS Linux 7. I get the following error:
"IOError: [Errno 2] No such file or directory: 'p2g_18546/diamond.matches.tab"
…
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hello，I have install falcon, and i have tried the example from https://github.com/PacificBiosciences/FALCON/wiki/Setup%3A-Running
the program ended without error message,but the log file is
```
201…
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```
==> make install
g++-8 -O3 -DNDEBUG -std=c++11 -Isrc -I /usr/local/opt/boost/include -fopenmp -mmacosx-version-min=10.7 -stdlib=libc++ -DUSE_BOOST src/cgi/core_genome_identity.cpp -o fastANI /us…
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add this to the ctat genome lib builder for FI for quick retrieval instead of building on the fly