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Hi there,
I would like to apply OFF-PEAK to some targeted EM-seq data (obtained using the Twist Methylome Panel). However, since the tool was designed specifically for exome sequencing data, all ta…
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User story:
As a user, I want easy access to browse all studies in the Catalog, and to be able to see GxE studies only. I want this to be presented on a separate page, https://www.ebi.ac.uk/gwas/stud…
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Issue destinado a recopilar aquellas fuentes bibliográficas, así como datos de secuenciación y herramientas de tratamiento y análisis de los mismos, que podrían resultar útiles e interesantes a la hor…
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Hi,
I'm curious if it is possible to use fastq files with reads from whole exome target-capture raw sequencing?
Thanks
Vinny
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Hello Igor,
I am currently extracting STR from 1000 Genome WGS and a WES dataset.
When comparing the distributions of the STRs used in the catalog between the two datasets, I can see some discrep…
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Hi,
I am using `caveman.pl` with Whole Exome sequencing (WXS) data however the execution ends in an error in the `mstep` process (please see the error below), this error occurs for various regions …
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**Describe the bug**
Dear bamtocov team,
I have human WES data and am trying to run bamtocov. After 6 hours, not even half is done/calculated, even when using 24 threads. Maybe I am missing somet…
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Issue by @MaxUlysse, moved from SciLifeLab#666
- [ ] [ExpansionHunter](https://github.com/Illumina/ExpansionHunter) for estimating repeat sizes
- [ ] [QDNAseq](https://github.com/ccagc/QDNAseq) CN…
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Hi,
Great tool and documentation! I've read on your documentation page that the tool might work with whole exome data - could you please provide more information on that? Is possible and is it rec…
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I've implemented souporcell for mixture of six-samples. and I have whole exome sequencing results for individual samples (i.e. six .fastq files).
**Then, how do I identify the assocations between sou…