-
### Description of the bug
I think the problem might be the format (using .list or .bed formats) that I used to use in intervals parameter and I do not know the correct format (even after reading the…
-
Hello!
Thank you for providing such an excellent software!
I am currently working on a study involving a fern. Due to a minor oversight, I sent its haploid gametophyte for sequencing, meaning I only…
-
May `--cov-threshold` be enabled to be multiple integers separated by a comma (and _median_ coverage as another option)?
: A versatile, scalable search engine for genomic and sequencing project metadata across the eukaryotic tree of life. Challis et al. 2023. Wellcome Open R…
-
Hi developer, I found that the virus genome obtained by genomad contains the letter M in addition to the letter ATCG. Is this normal? I don't know if it's due to genomad or sequencing data errors
-
## Overview
The purpose of this issue/document is two-fold:
- to summarize the regressions analyses of the project in a **textual form**
- to summarize the results of these regression analyses in …
-
**Have you checked the FAQ? https://github.com/google/deepvariant/blob/r1.6.1/docs/FAQ.md**:
**Describe the issue:**
I am trying to add the flags --parse_sam_aux_fields=true --use_original_quality…
-
Numbat has [Using Existing CNV Calls](https://kharchenkolab.github.io/numbat/articles/numbat.html#using-existing-cnv-calls) for borrowing information from sample-matched whole genome sequencing. Such …