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@slint here a question regarding how we could model virus/host relationship in the metadata.
In a publication, there is the virus, there is the host and the form a relations ship "is host of". if …
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Hi there,
Thanks for your work with DeepVirFinder. I've been trialing it with some environmental metagenome data, but was also interested in whether it would be appropriate for use with identifying…
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KP.3.1.1> A1755T(Orf1a:K497I)> T26323C, C28441T(Orf9b:S53L)
Query: A1755T, T26323C, C28441T
07-04 Tirol, Austria EPI_ISL_19300318
08-26 Noord-Brabant, Netherlands EPI_ISL_19413485
Netherlands 4,…
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### Overview
Biological graphs are vast and complex, with many different relationships and features under consideration. I seek to optimize graph traversal and add an intuitive user interface that ca…
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This is a follow-up of #118 where host "ID73" was the index case of the entire epidemic. My output from the ABM did not identify this host, as spotted by @ArtPoon , now the code is fixed.
I have n…
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Hi, I am trying to predit the splice site of an RNA virus artificially expressed in host genome. Because the organism I studied is not model organism, there is no VCF file. The pangolin seem to must u…
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1. **Orientation**
Overview of the Tech Society.
*Host: All 2nd and 3rd year members*
2. **Distributed Systems - Basics**
Introduction to scalable servers and tools.
*Host…
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This is a [nice paper](http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0027631) from my old adviser that attempts to identify what host a virus can infect based on its genome using mu…
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I worked a bit on the labelling matching with ENA / NCBI as I had a lot of mismatch issues with the development of the FAIR Data Station. I forked the repo and did an analysis on the terms in MIxS and…
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NTR: Regulation of killing by virus of host cell by post-segregational killing
Definition: Any process that modulates the frequency, rate, or extent of which a virus causes the death of daughter c…