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jessieren
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DeepVirFinder
Identifying viruses from metagenomic data by deep learning
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Need a GPU Version!
#50
SteamedFish6
opened
5 hours ago
0
How to extract virus sequence
#49
mengyuan-JI
opened
2 months ago
3
I tensorflow/compiler/mlir/mlir_graph_optimization_pass.cc:185] None of the MLIR Optimization Passes are enabled (registered 2)
#48
Betula0422
opened
2 months ago
0
the use of q-value in this project
#47
hwl26
opened
3 months ago
0
Encoding takes weeks to finish
#46
enricorox
opened
10 months ago
0
DVF goes into sleep state
#45
SenyuanGu
opened
1 year ago
2
[QUESTION] Support Python 3.7 or later
#44
alienzj
opened
1 year ago
1
problem when running dvf on HPC
#43
leihuaxin
opened
1 year ago
2
hello,I want to know how to set the -l parameter
#42
778055611
opened
1 year ago
0
training.py :: keras - tensorflow version requirements
#41
EricDeveaud
opened
1 year ago
0
IndexError: list index out of range (by using trained model for viral sequence scanning)
#40
ichotofiy
opened
1 year ago
0
Suggestion: Add mkl-service to conda install command
#39
erfanshek
opened
1 year ago
1
Test module falling after installation
#38
geboro
opened
1 year ago
4
File "/data1/qinjunjun/zhu_bingduzu/DeepVirFinder/dvf.py", line 212, in <module>
#37
qinjunjun
opened
2 years ago
0
Make a versioned release
#36
telatin
opened
2 years ago
2
issue installing using conda, python=2.7 required
#35
dluecking
opened
2 years ago
1
Support gzip and bzip2 input
#34
alienzj
opened
2 years ago
1
Results processing and extraction of region?
#33
bananabenana
opened
2 years ago
0
DeepVirFinder isn't work post conda install
#32
raw937
opened
2 years ago
1
AttributeError: ('The following error happened while compiling the node', DotModulo(A, s, m, A2, s2, m2), '\n', "module 'numpy.core.multiarray' has no attribute '_get_ndarray_c_version'")
#31
linda5mith
opened
2 years ago
3
Stuck on loading models?
#30
Joshcole2504
closed
2 years ago
2
Prediction refactoring
#29
jsgounot
opened
2 years ago
3
Runtime Error during test-run
#28
ghost
opened
2 years ago
2
DeepVirFinder gets stuck on some sequences
#27
runphaster
opened
2 years ago
2
Refactoring of main loop
#26
cerebis
opened
3 years ago
1
Update documentation for h5py API schism
#25
ryneches
opened
3 years ago
0
Server's running time
#24
paulaistvan
opened
3 years ago
0
ValueError: not enough values to unpack
#23
alexmsalmeida
closed
3 years ago
3
filelog not imported
#22
askerdb
opened
3 years ago
3
Running time
#21
rubenbucio
opened
3 years ago
4
compiling the node error
#20
wolfQK
opened
3 years ago
2
OSError: Unable to open file (unable to lock file)
#19
snayfach
closed
3 years ago
1
AttributeError: 'str' object has no attribute 'decode'
#18
glickmac
opened
3 years ago
1
Trained models for RNA viruses
#17
mlhoggard
opened
3 years ago
2
How can DeepVirFinder ensure the accuracy of long contig predictions?
#16
ZongzhiWu
opened
3 years ago
2
Data set Accession Numbers not complete
#15
nkarisan
closed
3 years ago
2
Make deepvirfinder pip installable
#14
papanikos
opened
3 years ago
0
Training on Windows
#13
andrewjmc
closed
3 years ago
1
val_acc vs. val_accuracy
#12
andrewjmc
closed
3 years ago
1
PermissionError: [Errno 13] Permission denied
#11
gabrielrfernandes
opened
3 years ago
1
Score and q-value
#10
sxh1136
opened
4 years ago
0
HPC and DeepVirFinder
#9
soilmicrobiome
opened
4 years ago
0
theano issue putatively related to the slowdown of the program
#8
ilnamkang
opened
4 years ago
2
关于Training Data
#7
anothersum
opened
5 years ago
0
Estimating q-values based on p-values, error in R
#6
miasungeunlee
opened
5 years ago
3
q-value calculation issues and anti-conservative p-value distribution
#5
nikhilg123
opened
5 years ago
1
program uses more cores than specified
#4
snayfach
closed
3 years ago
1
Training data
#3
snayfach
opened
5 years ago
0
Error in calculating q-value
#2
denisbruno1
opened
5 years ago
5
DeepVirFinder使用问题
#1
quliping
closed
5 years ago
1
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