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Need to add the zero variance check in Pool estimation because it could cause error in the PCA in certain scenarios
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Hi,
i’ve using qmtools for a while and think you’ve done a great job in making a package that provides a flexible workflow for analysing quantitative metabolomics data. I’m currently working on a da…
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Some models have the same metabolite under different IDs in the model. This potentially causes one-to-many relationships when comparing two models, thus we would need to unify the metabolites in terms…
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**Is your feature request related to a problem? Please describe.**
Representing active metabolites in Inxight:Drugs: https://drugs.ncats.io/drug/Q3JTX2Q7TU
**What working group (or team) did this …
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Correlate metabolites to pathways. We have to look for a database and enrichment method and then maybe just start with basic correlation values.
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Hello, I am running ChemRich analysis in R using the script chemrich_chemical_classes.R. Can I use the fold change values of metabolites between two groups as the effect size? When I use fold change …
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Dear Aurelien, Attila,
Excellent bioinfo tool, congratulations!
I have two questions concerning to the metabolite annotation in the PKN
1/ Looking the full PKN network, I have realized that m…
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Assuming we have a list of matched metabolites, merge 2 models via a common compartment
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**Use case 11: Related Proteins/Metabolites across DCCs**
>Few steps did not work for this workflow, e.g., - Mano
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> Reformat and graph plot of StringDB PPI didn’t display or took long time.…
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Dear all,
I used ReDU for the first time.
It would be great if you could add TripleTOF6600 from Sciex to your drop-down menue.
We used methanol-water (8:2) which was also not in the list.
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