-
Dear all users of decontam,
I am very new to this and i am having some issues with the processing of my data,
I have obtained a feature table using EPI2ME 16s Workflow.
But i dont have OTU i h…
-
Oxford Nanopore has a very appealing amplicon-based, size-unrestricted sequencing application. I have CRISPResso2 tightly integrated into our core's operations, but methods used with CRISPResso2 aren'…
-
To determine which GPUs people need for their projects it would be great to have some benchmarks for the GPUs that you test dorado on. If you expand the table you already have with some values for the…
-
Hi, thank you for developing this excellent software. I encountered an issue while running isoquant.py to analyze Oxford Nanopore data. Could you please let me know how to resolve it? I would greatly…
-
I recently started dipping my toes into published datasets from the Oxford Nanopore MinION sequencer. Their format is an hdf5 file, containing several types of metadata, "event data" (which is essenti…
-
cc @turbomam
If we need to represent Illumina NovaSeq 6000 S4, I assume we would create a subclass of
id: OBI:0400043
name: flow cell
def: "Aparatus in the fluidic subsystem where the sheath…
-
## Paste the link of the GitHub organisation below and submit
https://github.com/nanoporetech
---
###### Please subscribe to this thread to get notified when a new repository is created
-
Please, explain what read length should I use when running bracken on long read sequencing data
-
**Format name:** < FAST5 >
**Short description:** < The FAST5 file format stores the raw electrical signal levels measured by the nanopores in flow cells for Oxford Nanopore Technologies sequencer…
-
I see you now have PromethION data for several of the individuals, available in fastq format. However, I don't see a link to the raw fast5. Is this available somewhere?