issues
search
BaselAbujamous
/
clust
Automatic and optimised consensus clustering of one or more heterogeneous datasets
Other
163
stars
36
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
How do I control the PDF output to make the x-axis with sample names more readable?
#83
SchwarzEM
opened
5 months ago
0
Segmentation fault on example dataset
#82
christabucao
opened
5 months ago
0
ValueError during concatenation in output.py script
#81
SuvratK
opened
9 months ago
0
Issue with --no-fil-flat
#80
lucasinchausti
opened
1 year ago
0
Fix scipy random
#79
BaselAbujamous
closed
1 year ago
0
Different number of clusters and genes in each cluster based on the order of samples in Replicates.txt file
#78
dadrasarmin
opened
2 years ago
0
AttributeError: Module 'scipy' has no attribute 'random'
#77
gazalk
closed
1 year ago
13
Type conversion errors when reading replicates file
#76
ijhoskins
opened
2 years ago
7
setup file typo/bug fixes
#75
BaselAbujamous
closed
2 years ago
0
removed n_jobs from sklearn calls due to deprecation
#74
BaselAbujamous
closed
2 years ago
0
clust not working after installing via bioconda
#73
ethanjredmond
opened
2 years ago
1
Getting error when executing clust
#72
diego-perojil
closed
2 years ago
4
Can this be used with a precomputed distance matrix?
#71
jolespin
opened
3 years ago
0
Color !
#70
saheljahan
opened
3 years ago
0
Server Error in '/' Application.
#69
pekingsci
opened
3 years ago
1
Feature Request - Separate image for each cluster
#68
sagarutturkar
opened
3 years ago
0
how to choose a better tight value '-t' ?
#67
Ruismart
opened
3 years ago
0
IndexError: arrays used as indices must be of integer (or boolean) type
#66
aliceb5
opened
3 years ago
0
not able to normalize the expression raw dataset using clust
#65
vishnurun7
opened
3 years ago
0
drastically different results between version 1.8.10 and version 1.12.0
#64
ereverman
opened
3 years ago
3
Details about how expression values in replicates are collapsed to one (per condition) value
#63
SamMondal
opened
3 years ago
1
Error using replicates files
#62
anikaliu
opened
3 years ago
0
PDF file is missing
#61
hba151
opened
3 years ago
0
ValueError: could not convert string to float
#60
nat2bee
closed
4 years ago
2
MemoryError
#59
Hamsini-Ray
closed
4 years ago
1
Default Y-axis label in plot
#58
ikar1234
opened
4 years ago
2
Typo fix in README
#57
BaselAbujamous
closed
4 years ago
0
more_itertools versioning???
#56
DallasThomas
closed
4 years ago
1
error Processed_Data file (normalized data)
#55
incle440
opened
4 years ago
0
NameError: name 'Ds' is not defined
#54
dsjones552
closed
4 years ago
3
Unrecognised replicate name (sMEPI_rep1) in line 1 in replicates
#53
Zefeng-Wu
closed
3 years ago
1
Fix page output
#52
johnomics
closed
4 years ago
0
Subclustering: inconsistent co-abundance pattern
#51
MiguelCos
opened
4 years ago
7
"Error: could not save clusters plots in a PDF file." with more than 11 clusters
#50
michallipinski
closed
4 years ago
5
TypeError: Cannot cast array from dtype('O') to dtype('float64') according to the rule 'safe'
#49
maxnest
closed
4 years ago
2
Clust 1.10.7 incompatibility issue with Pandas 0.25.0
#48
adriayumi
closed
5 years ago
1
How to deal with missing data values
#47
andhartm
closed
5 years ago
2
TypeError: Cannot cast array from dtype('O') to dtype('float64') according to the rule 'safe'
#46
zebrafish-507
closed
5 years ago
0
ImportError: No module named numpy
#45
jianhaizhang
closed
5 years ago
3
Too many genes not included in any cluster
#44
LQHHHHH
closed
5 years ago
1
Too many missing genes
#43
wyim-pgl
closed
4 years ago
1
Fixed a bug in v1.10.0 generating the PDF for the plots
#42
BaselAbujamous
closed
5 years ago
0
Smaller and more clusters
#41
jianhaizhang
closed
4 years ago
1
cluster plots in PDF issue
#40
Wen-Juan
closed
5 years ago
12
Migrate to python3
#39
BaselAbujamous
closed
5 years ago
0
Order of genes in the output vs the input
#38
BaselAbujamous
closed
4 years ago
0
Runclust to return clustering
#37
BaselAbujamous
closed
5 years ago
0
plot
#36
wangjingshen
closed
5 years ago
1
plot issue
#35
wangjingshen
closed
5 years ago
6
Run command
#34
jianhaizhang
closed
5 years ago
4
Next