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BlueBrain
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BlueCelluLab
Biologically detailed neural network simulations and analysis API
https://bluecellulab.readthedocs.io/en/latest/
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add contributing guidelines
#190
anilbey
opened
17 hours ago
1
[BGLPY-52] create progress bar for instantiate_gids(gids,synapse_detail=2)
#189
anilbey
opened
2 weeks ago
1
Joss paper
#188
anilbey
opened
2 weeks ago
1
Refactor 'projections'
#187
ilkilic
opened
1 month ago
1
Feature request: ability to check for node sets in the simulation node sets file
#186
joni-herttuainen
opened
1 month ago
0
Refactor: remove deprecated source population field in SynapseReplay
#185
ilkilic
closed
1 month ago
0
Fix: handle edge case in synapse location calculation with syn_description
#184
ilkilic
closed
1 month ago
10
Bug: `matplotlib>=3.9` - module 'matplotlib.cm' has no attribute 'get_cmap'
#183
joni-herttuainen
closed
1 month ago
2
amplitude based stimuli in apply_multiple_stimuli
#182
AurelienJaquier
closed
1 month ago
3
further restrict IsolatedProcess by setting multiprocessing start method
#181
anilbey
closed
1 month ago
1
StimulusFactory: enable amplitude based versions of the protocols
#180
anilbey
closed
1 month ago
2
add cheops to list of stim docs
#179
anilbey
closed
1 month ago
0
warning to log in serialized_sections #176
#178
anilbey
closed
2 months ago
1
relax h5py to >=3.8.0, to make it easier to package in spack
#177
mgeplf
closed
2 months ago
1
Warning needed on serialised sections?
#176
arnaudon
closed
1 month ago
3
remove examples from package distribution
#175
anilbey
closed
2 months ago
1
CI(dependabot): Bump anothrNick/github-tag-action from 1.67.0 to 1.69.0
#174
dependabot[bot]
closed
2 months ago
0
Update singlecell and sequence-stimuli example
#173
darshanmandge
closed
2 months ago
1
add cheops stimuli to StimulusFactory vsc[#minor]
#172
anilbey
closed
2 months ago
1
SONATA update: expect synapse_replay files as h5
#171
anilbey
closed
2 months ago
0
update plot aesthetics in example notebooks
#170
anilbey
closed
2 months ago
1
Fix accessing afferent_section_pos of synapse description
#169
anilbey
closed
2 months ago
1
fetch afferent_section_pos from sonata
#168
anilbey
closed
2 months ago
4
account for unknown section types
#167
anilbey
closed
2 months ago
1
bug when morphology is not in a subfolder
#166
AurelienJaquier
opened
2 months ago
0
Controls the passing of NEURON global params to processes
#165
anilbey
closed
2 months ago
1
Update stimulus factory API [vcs: #minor]
#164
anilbey
closed
2 months ago
3
fix spike detection in tools
#163
AurelienJaquier
closed
2 months ago
0
add macos ci tests
#162
anilbey
closed
2 months ago
1
Improve threshold search
#161
AurelienJaquier
closed
2 months ago
0
FIX: bug in setting NeuronGlobals by CircuitSim::run
#160
anilbey
closed
2 months ago
1
update pyproject.toml simplify setuptools package find
#159
anilbey
closed
2 months ago
1
deprecate SSim use CircuitSimulation
#158
anilbey
closed
2 months ago
0
rm debugtest mark, tests are equally debuggable
#157
anilbey
closed
2 months ago
1
Migrate from setup.py to pyproject.toml
#156
anilbey
closed
2 months ago
1
CI(dependabot): Bump softprops/action-gh-release from 1 to 2
#155
dependabot[bot]
closed
2 months ago
0
decouple setting global neuron attributes from sim run [vcs: #minor]
#154
anilbey
closed
3 months ago
2
celsius and v_init can be defined by neuron or within the template, enable it
#153
anilbey
closed
3 months ago
3
Address multiple neuron references pointing to same recording
#152
anilbey
opened
3 months ago
0
injecting a sequence of stimuli on the same cell in isolation
#151
anilbey
closed
3 months ago
7
add neuroglia synapses in bluecellulab
#150
sfarina05
opened
3 months ago
1
Refactor functions that include running isolated simulations [vcs: #minor]
#149
anilbey
closed
3 months ago
1
Use CaptureOutput to forward hoc's stdout to logger.debug
#148
anilbey
closed
4 months ago
1
TStim implementation in add_step and add_ramp
#147
anilbey
closed
3 months ago
1
migrate pkg_resources -> importlib.resources
#146
anilbey
closed
4 months ago
0
Performance: enable tox-uv in CI workflows
#145
anilbey
closed
4 months ago
0
map SONATA spec's LINEAR input
#144
anilbey
opened
4 months ago
0
Run a profiler to detect performance bottlenecks
#143
anilbey
opened
4 months ago
0
Enable injecting Python generated Stimuli [vcs: #minor]
#142
anilbey
closed
4 months ago
2
CI: pass CODECOV token in release->test workflow call
#141
anilbey
closed
4 months ago
1
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