CIBERER GdTBioinfo-nf-cnvs issues

CIBERER / GdTBioinfo-nf-cnvs

Pipeline in nextflow to detect structural variants developed at CIBERER

MIT License

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Actualization modules.json with bedtools_genomecov

#70 RojoCarrillo closed 4 months ago
1
Insert bedtools_genomecov from nf-core

#69 RojoCarrillo closed 4 months ago
0
Import Bedtools intersect Nf-core

#68 RojoCarrillo closed 4 months ago
4
Importing bedtools_merge module from nf-core

#67 marinaEM closed 4 months ago
2
Import bedtools subtract module

#66 RojoCarrillo closed 4 months ago
1
Devel merge

#65 yocra3 closed 5 months ago
1
Devel

#64 yocra3 closed 5 months ago
0
Templates

#63 paulaidt closed 5 months ago
0
Add @paulaidt as contributor

#62 paulaidt closed 5 months ago
0
Merge pull request #59 from martasevilla/samtools_index

#61 yocra3 closed 2 years ago
0
Import modules samtools index

#60 martasevilla closed 2 years ago
1
Import the module samtools/index

#59 martasevilla closed 2 years ago
0
[SUBWORKFLOW] FJD

#58 yocra3 closed 6 months ago
0
[SUBWORKFLOW] SJD

#57 yocra3 closed 6 months ago
0
[SUBWORKFLOW] RUN_XHMM

#56 yocra3 opened 3 years ago
0
[SUBWORKFLOW] INGEMM

#55 yocra3 closed 6 months ago
0
[MODULO] Estandarizar output XHMM

#54 yocra3 opened 3 years ago
0
[MODULO] Filtro de XHMM

#53 yocra3 opened 3 years ago
0
[MODULO] XHMM

#52 yocra3 opened 3 years ago
0
[SUBWORKFLOW] IDIBELL_ICO

#51 yocra3 closed 6 months ago
0
[MODULO] R/CNVfilterR

#50 yocra3 opened 3 years ago
0
[MODULO] R/joinvariants

#49 yocra3 closed 6 months ago
0
[MODULO] samtools/mpileup

#48 yocra3 closed 6 months ago
0
[MODULO] samtools/index

#47 yocra3 closed 2 years ago
0
[SUBWORKFLOW] RUN_DECON

#46 yocra3 opened 3 years ago
0
[MODULO] Estandarizar output R/DeCON

#45 yocra3 opened 3 years ago
0
[MODULO] Filtro de R/DeCON

#44 yocra3 opened 3 years ago
0
[MODULO] R/DeCON

#43 yocra3 opened 3 years ago
1
[SUBWORKFLOW] RUN_CODEX2

#42 yocra3 opened 3 years ago
0
[MODULO] Estandarizar output R/CODEX2

#41 yocra3 opened 3 years ago
0
[MODULO] FIltro R/CODEX2

#40 yocra3 opened 3 years ago
0
[SUBWORKFLOW] RUN_GRIDSS

#39 yocra3 opened 3 years ago
0
[MODULO] Estandarizar output GRIDSS

#38 yocra3 opened 3 years ago
0
[MODULO] Filtro GRIDSS

#37 yocra3 opened 3 years ago
0
[SUBWORKFLOW] RUN_MANTA

#36 yocra3 opened 3 years ago
0
[MODULO] Filtro Manta

#35 yocra3 opened 3 years ago
0
[MODULO] Estandarizar output de manta

#34 yocra3 opened 3 years ago
0
[MODULO] Juntar calls de diferentes batches

#33 yocra3 opened 3 years ago
0
[SUBWORKFLOW] RUN_EXOMEDEPTH

#32 yocra3 opened 3 years ago
0
[SUBWORKFLOW] Filtro de variantes comunes

#31 yocra3 opened 3 years ago
0
[MODULO] Estandarizar ExomeDepth output

#30 yocra3 opened 3 years ago
0
[MODULO] python/formatcnvcalls

#29 yocra3 opened 3 years ago
0
[MODULO] Script dividir calls CNVs en DUP y DEL

#28 yocra3 closed 3 years ago
0
[SUBWORKFLOW] FPS

#27 yocra3 closed 6 months ago
0
[MODULO] Script para juntar calls de diferentes herramientas

#26 yocra3 opened 3 years ago
0
[MODULO] bedtools/subtract

#25 yocra3 closed 4 months ago
2
[MODULO] bedtools/merge

#24 yocra3 closed 4 months ago
0
[MODULO] R/CODEX2

#23 yocra3 opened 3 years ago
0
[MODULO] GRIDSS

#22 yocra3 opened 3 years ago
0
[MODULO] manta

#21 yocra3 opened 3 years ago
0