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CIBERER
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GdTBioinfo-nf-cnvs
Pipeline in nextflow to detect structural variants developed at CIBERER
MIT License
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Actualization modules.json with bedtools_genomecov
#70
RojoCarrillo
closed
2 months ago
1
Insert bedtools_genomecov from nf-core
#69
RojoCarrillo
closed
2 months ago
0
Import Bedtools intersect Nf-core
#68
RojoCarrillo
closed
2 months ago
4
Importing bedtools_merge module from nf-core
#67
marinaEM
closed
2 months ago
2
Import bedtools subtract module
#66
RojoCarrillo
closed
2 months ago
1
Devel merge
#65
yocra3
closed
2 months ago
1
Devel
#64
yocra3
closed
2 months ago
0
Templates
#63
paulaidt
closed
2 months ago
0
Add @paulaidt as contributor
#62
paulaidt
closed
3 months ago
0
Merge pull request #59 from martasevilla/samtools_index
#61
yocra3
closed
2 years ago
0
Import modules samtools index
#60
martasevilla
closed
2 years ago
1
Import the module samtools/index
#59
martasevilla
closed
2 years ago
0
[SUBWORKFLOW] FJD
#58
yocra3
closed
4 months ago
0
[SUBWORKFLOW] SJD
#57
yocra3
closed
4 months ago
0
[SUBWORKFLOW] RUN_XHMM
#56
yocra3
opened
3 years ago
0
[SUBWORKFLOW] INGEMM
#55
yocra3
closed
4 months ago
0
[MODULO] Estandarizar output XHMM
#54
yocra3
opened
3 years ago
0
[MODULO] Filtro de XHMM
#53
yocra3
opened
3 years ago
0
[MODULO] XHMM
#52
yocra3
opened
3 years ago
0
[SUBWORKFLOW] IDIBELL_ICO
#51
yocra3
closed
4 months ago
0
[MODULO] R/CNVfilterR
#50
yocra3
opened
3 years ago
0
[MODULO] R/joinvariants
#49
yocra3
closed
4 months ago
0
[MODULO] samtools/mpileup
#48
yocra3
closed
4 months ago
0
[MODULO] samtools/index
#47
yocra3
closed
2 years ago
0
[SUBWORKFLOW] RUN_DECON
#46
yocra3
opened
3 years ago
0
[MODULO] Estandarizar output R/DeCON
#45
yocra3
opened
3 years ago
0
[MODULO] Filtro de R/DeCON
#44
yocra3
opened
3 years ago
0
[MODULO] R/DeCON
#43
yocra3
opened
3 years ago
1
[SUBWORKFLOW] RUN_CODEX2
#42
yocra3
opened
3 years ago
0
[MODULO] Estandarizar output R/CODEX2
#41
yocra3
opened
3 years ago
0
[MODULO] FIltro R/CODEX2
#40
yocra3
opened
3 years ago
0
[SUBWORKFLOW] RUN_GRIDSS
#39
yocra3
opened
3 years ago
0
[MODULO] Estandarizar output GRIDSS
#38
yocra3
opened
3 years ago
0
[MODULO] Filtro GRIDSS
#37
yocra3
opened
3 years ago
0
[SUBWORKFLOW] RUN_MANTA
#36
yocra3
opened
3 years ago
0
[MODULO] Filtro Manta
#35
yocra3
opened
3 years ago
0
[MODULO] Estandarizar output de manta
#34
yocra3
opened
3 years ago
0
[MODULO] Juntar calls de diferentes batches
#33
yocra3
opened
3 years ago
0
[SUBWORKFLOW] RUN_EXOMEDEPTH
#32
yocra3
opened
3 years ago
0
[SUBWORKFLOW] Filtro de variantes comunes
#31
yocra3
opened
3 years ago
0
[MODULO] Estandarizar ExomeDepth output
#30
yocra3
opened
3 years ago
0
[MODULO] python/formatcnvcalls
#29
yocra3
opened
3 years ago
0
[MODULO] Script dividir calls CNVs en DUP y DEL
#28
yocra3
closed
3 years ago
0
[SUBWORKFLOW] FPS
#27
yocra3
closed
4 months ago
0
[MODULO] Script para juntar calls de diferentes herramientas
#26
yocra3
opened
3 years ago
0
[MODULO] bedtools/subtract
#25
yocra3
closed
2 months ago
2
[MODULO] bedtools/merge
#24
yocra3
closed
1 month ago
0
[MODULO] R/CODEX2
#23
yocra3
opened
3 years ago
0
[MODULO] GRIDSS
#22
yocra3
opened
3 years ago
0
[MODULO] manta
#21
yocra3
opened
3 years ago
0
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