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Clinical-Genomics-Lund
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SomaticPanelPipeline
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Rename workflows and subworkflows
#19
ViktorHy
closed
8 months ago
1
Look into CNV-merge through SVDB
#18
ViktorHy
closed
9 months ago
1
Make pipeline more develop-friendly
#17
ViktorHy
opened
10 months ago
2
Added stubs to all processes and modified bits to be working with it
#16
A97paupic
opened
1 year ago
0
Reduce publication dsl1
#15
ViktorHy
closed
1 year ago
0
only publish UMI-reduced bam
#14
ViktorHy
closed
1 year ago
0
New germline myeloid
#13
ViktorHy
closed
1 year ago
0
Dsl2 unifycnvs
#12
ViktorHy
closed
1 year ago
0
Riktad paired diagnosis
#11
ViktorHy
closed
1 year ago
1
added optional subsampling (seqtk) and optional quality filtering (fastp)
#10
ViktorHy
closed
1 year ago
0
Dsl2 cnv
#9
ViktorHy
closed
1 year ago
0
add support for new register_sample.py
#8
ViktorHy
closed
9 months ago
1
coyote fixes, groupTuple() fucking me over
#7
ViktorHy
closed
1 year ago
0
Add subpanel to coyoteimport
#6
ViktorHy
closed
1 year ago
4
fixed normal_path to tumor_path for normal samples contamination calc
#5
ViktorHy
closed
1 year ago
1
Add contamination
#4
ViktorHy
closed
1 year ago
1
Myeloid hg38
#3
bjhall
closed
3 years ago
0
all-in-one csv per assay support added
#2
ViktorHy
closed
3 years ago
0
Update myeloid panel analysis to hg38
#1
bjhall
closed
2 years ago
0
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