CollasLab edd issues - Githubissues

CollasLab / edd

Enriched Domain Detector for ChIP-seq data

https://pypi.python.org/pypi/edd

MIT License

15 stars 4 forks source link

issues

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Newest Most commented Recently updated Oldest Least commented Least recently updated

Right installation order here!

#25 StrohD opened 5 months ago
0
What are the values in the output peak file?

#24 rikrdo89 opened 11 months ago
0
EED can not be install or run without multiple errors and conflicts

#23 akukalev opened 1 year ago
0
Unable to install

#22 Stein-ja opened 1 year ago
0
Adding example Dockerfile

#21 rabdill opened 2 years ago
2
Error Traceback (most recent call last): line 133, in <module> import eddlib.experiment

#20 hfx541 opened 2 years ago
4
I had a problem that I couldn’t solve, and neither Google nor biostar found a solution. If it is convenient, please help me.

#19 zhangshuli-stu opened 2 years ago
0
Is it possible to change log_ratio_bin_size

#18 FatihSarigol opened 3 years ago
1
AttributeError: 'module' object has no attribute '__version__'

#17 Mingsenli opened 3 years ago
7
ImportError: path/to/lib/python2.7/site-packages/eddlib/read_bam.so: undefined symbol: bgzf_read

#16 HundredDays opened 3 years ago
1
statsmodels 0.11.0 about AttributeError: 'module' object has no attribute '__version__'

#15 dailimeng opened 4 years ago
0
readme minor typo

#14 zorg-it opened 4 years ago
0
Could not find a suitable bin size for Macaque genome

#13 runningvato opened 5 years ago
0
Error in reading bam file

#12 salmonm opened 6 years ago
1
AttributeError: 'module' object has no attribute 'FastxRecord'

#11 endrebak opened 6 years ago
2
Add quick start example

#10 endrebak closed 5 years ago
1
Problem running edd without a defined gap

#9 runningvato closed 6 years ago
2
Add edd to bioconda?

#8 endrebak closed 6 years ago
5
FDR specification

#7 yeminlan closed 7 years ago
1
AssertionError

#6 endrebak closed 7 years ago
6
question about "bin-size"

#5 lixin4306ren closed 8 years ago
9
question about reporting more domains

#4 steffenheyne closed 8 years ago
1
error probably during reading of input bam

#3 steffenheyne closed 9 years ago
6
Unable to install EDD

#2 ghost closed 9 years ago
2
Installation issue with pysam

#1 aubinthomas closed 9 years ago
1

CollasLab / edd

issues

Right installation order here!

What are the values in the output peak file?

EED can not be install or run without multiple errors and conflicts

Unable to install

Adding example Dockerfile

Error Traceback (most recent call last): line 133, in <module> import eddlib.experiment

I had a problem that I couldn’t solve, and neither Google nor biostar found a solution. If it is convenient, please help me.

Is it possible to change log_ratio_bin_size

AttributeError: 'module' object has no attribute 'version'

ImportError: path/to/lib/python2.7/site-packages/eddlib/read_bam.so: undefined symbol: bgzf_read

statsmodels 0.11.0 about AttributeError: 'module' object has no attribute 'version'

readme minor typo

Could not find a suitable bin size for Macaque genome

Error in reading bam file

AttributeError: 'module' object has no attribute 'FastxRecord'

Add quick start example

Problem running edd without a defined gap

Add edd to bioconda?

FDR specification

AssertionError

question about "bin-size"

question about reporting more domains

error probably during reading of input bam

Unable to install EDD

Installation issue with pysam