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HelmholtzAI-Consultants-Munich
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oligo-designer-toolsuite
Develop custom oligo design pipelines.
https://oligo-designer-toolsuite.readthedocs.io/en/latest/
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80 update pytests
#87
lisa-sousa
opened
2 months ago
0
Faster heuristic method to generate non-overlapping sets
#86
IsraMekki0
opened
2 months ago
0
72 database table output
#85
lisa-sousa
closed
1 month ago
0
81 intergenic sequence computation
#84
lisa-sousa
closed
1 month ago
0
improve computation of oligo sets
#83
lisa-sousa
opened
2 months ago
0
documentation
#82
lisa-sousa
opened
2 months ago
0
intergenic sequence computation
#81
lisa-sousa
closed
1 month ago
0
update pytests
#80
lisa-sousa
opened
2 months ago
0
77 filter for exon number
#79
lisa-sousa
closed
1 month ago
0
62 seqfish pipeline
#78
lisa-sousa
closed
1 month ago
0
Filter for exon number
#77
lisa-sousa
closed
1 month ago
0
75 exon junction computation
#76
lisa-sousa
closed
1 month ago
0
Exon junction computation
#75
lisa-sousa
closed
1 month ago
0
71 utr sequence
#74
lisa-sousa
closed
1 month ago
0
69 filter for isoform consensus
#73
lisa-sousa
closed
1 month ago
0
Database Table output
#72
lisa-sousa
closed
1 month ago
0
UTR sequence computation
#71
lisa-sousa
closed
1 month ago
0
Pipelines - entry points
#70
lisa-sousa
opened
3 months ago
0
Filter for Isoform Consensus
#69
lisa-sousa
closed
1 month ago
0
remove Bio package for blast and turn into subprocess
#68
lisa-sousa
closed
3 months ago
0
Enhance database loading
#67
lisa-sousa
closed
3 months ago
0
Merfish pipeline
#66
IsraMekki0
closed
4 months ago
0
Implemented heterodimer filter
#65
IsraMekki0
closed
4 months ago
0
53 scrinshot pipeline
#64
lisa-sousa
closed
4 months ago
0
Oligo-seq-pipeline
#63
francesco-campi
closed
4 months ago
0
SeqFISH pipeline
#62
lisa-sousa
closed
1 month ago
0
MERFISH pipeline
#61
lisa-sousa
opened
5 months ago
0
52 oligo scoring functions
#60
lisa-sousa
closed
5 months ago
0
Bio.Application deprecation warning
#59
francesco-campi
closed
3 months ago
1
Divide OligoAttributes into two classes
#58
lisa-sousa
opened
5 months ago
2
Update tests
#57
IsraMekki0
closed
5 months ago
0
Changed instances of dictionaries to LRUDDBDict
#56
IsraMekki0
closed
5 months ago
1
49 exact match filter
#55
lisa-sousa
closed
5 months ago
0
AI-filters
#54
francesco-campi
closed
6 months ago
0
SCRINSHOT pipeline
#53
lisa-sousa
closed
4 months ago
0
Oligo Scoring Functions
#52
lisa-sousa
closed
5 months ago
0
46 oligo database attributes class
#51
lisa-sousa
closed
5 months ago
0
Filename for regions_with_insufficient_oligos
#50
lisa-sousa
closed
5 months ago
0
Exact Match Filter
#49
lisa-sousa
closed
5 months ago
0
39 integrate exact match filter into cross hybridization filter
#48
lisa-sousa
closed
7 months ago
0
Add codecov
#47
IsraMekki0
opened
8 months ago
1
Oligo Database Attributes Class
#46
lisa-sousa
closed
5 months ago
0
Bugfix/test errors
#45
IsraMekki0
closed
7 months ago
0
Bugfix/test errors
#44
IsraMekki0
closed
8 months ago
1
Types and Constants
#43
lisa-sousa
closed
5 months ago
1
Some tests are not running
#41
IsraMekki0
closed
5 months ago
0
Integrate the new data structure
#40
IsraMekki0
closed
5 months ago
0
Integrate exact match filter into cross hybridization filter
#39
IsraMekki0
closed
7 months ago
1
Feature/refactor_property_filter
#38
francesco-campi
closed
8 months ago
0
Feature/refactor property filter
#37
lisa-sousa
closed
8 months ago
0
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