PreibischLab BigStitcher issues

PreibischLab / BigStitcher

ImgLib2/BDV implementation of Stitching for large datasets

GNU General Public License v2.0

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issues

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Read tile positions from file in macro

#94 lambdamoses closed 3 years ago
2
Saving selected views as new HDF5 file fails

#93 nvladimus closed 3 years ago
2
Proper macro for headless bounding box calculation

#92 miketaormina opened 3 years ago
2
SciViewer breaking recent update

#91 SinclairRozie closed 3 years ago
1
Importing H5 from BigStitcher to OMERO?

#90 cikus3 opened 3 years ago
2
Problem stitching mosaic of oib Olympus files

#89 auesro opened 3 years ago
8
Exception: Number of elements in ArrayImg too big..

#88 JLrumberger opened 3 years ago
3
bigdataviewer-core-10.0.2 adaptations - some functionalities disabled

#87 NicoKiaru closed 3 years ago
1
Spaces in file names

#86 saskra opened 3 years ago
2
z layers are not recognized

#85 saskra closed 3 years ago
3
java.lang.NullPointerException

#84 saskra opened 3 years ago
2
Example Datasets/ Visualization

#83 saskra closed 3 years ago
1
Dark region after image fusion

#82 VasylVaskivskyi closed 3 years ago
6
Split Images without display doesn't split

#81 HugoB closed 2 years ago
0
Cannot load JNA library: java.lang.UnsatisfiedLinkError for deconvolution

#80 bruvellu opened 4 years ago
0
bigdataviewer-core-10.0.2 adaptations - some functionalities disabled

#79 NicoKiaru closed 3 years ago
3
java.lang.NoClassDefFoundError: net/imglib2/converter/BiConverter

#78 lacan opened 4 years ago
3
content based fusion option generates NullPointerException in FFTMethods.realToComplex

#77 mhdominguez opened 4 years ago
1
[ERROR] Module threw error java.lang.NoSuchFieldError: list - When creating or loading xml datasets.

#76 nhoeche opened 4 years ago
0
NoClassDefFoundError: StopWatch

#75 haesleinhuepf closed 4 years ago
9
Getting BigStitcher to work with pyimagej

#74 alam-shahul closed 4 years ago
3
'Bake BDV manual transformation' not available in Stiching mode

#73 lollopus closed 4 years ago
5
Image fusion very slow for multi terabyte dataset

#72 dpshepherd opened 4 years ago
18
Error while calculating pairwise shifts with dataset saved as compressed N5

#71 HugoB closed 4 years ago
1
Batch Processing -> Fuse -> save as new hdf5 crashes

#70 martinschorb opened 4 years ago
1
"Batch Processing - Define dataset" leads to neverending macro

#69 martinschorb closed 4 years ago
7
export to hdf5 insanely slow

#68 martinschorb closed 4 years ago
9
Unable to save multiview deconvolution as TIFF

#67 ctrueden opened 4 years ago
5
Add possibility to manually rotate individual tiles

#66 zifredder closed 4 years ago
9
tiles in czi file don't appear

#65 fowlkes opened 4 years ago
2
treatment of black pixels

#64 Sh4zKh4n opened 4 years ago
0
"Load Tile Configuration from File" result differs when run from GUI or Batch Tools

#63 walkernoreen opened 4 years ago
0
B3D compression filter

#62 HunterJHU opened 5 years ago
1
Can no longer view or save images after deconvolution

#61 lacan closed 4 years ago
5
Pairwise shift calculation throws exception if pixel values outside 0-32768 range

#60 VolkerH opened 5 years ago
9
Multiview - Resave as TIFF - NullPointerException

#59 hajaalin opened 5 years ago
1
Image fusion with "Save as (compressed) TIFF stacks" stopped working

#58 pawlowska closed 2 years ago
0
avoid out of bounds exception in BDV PopupStitching for 2D datasets

#57 NicoKiaru closed 5 years ago
4
Fused image: import XML voxel size into Image Properties

#56 nvladimus opened 5 years ago
0
Fuse dataset in --headless_mode results in XmlIoBasicImgLoader-Error

#55 maxsenh opened 5 years ago
1
data stored on server cannot be saved in windows

#54 lacan closed 5 years ago
2
Error creating a bounding box

#53 lacan closed 5 years ago
5
Multiview Deconvolution kernel size error

#52 mnqslbs2 opened 5 years ago
2
importing Luxendo files

#51 pawlowska opened 5 years ago
0
Fusing with down-sampling (bug?)

#50 adamkglaser opened 5 years ago
2
Recording macros for automating BigStitcher

#49 DominikStich opened 5 years ago
1
Limiting CPU usage

#48 adamkglaser opened 5 years ago
2
Clarify definition of "Check stack sizes" option

#47 etadobson opened 5 years ago
0
Stitching Time lapse movie: unexpected results in Calculate Pairwise Shifts

#46 walkernoreen opened 5 years ago
1
Auto-color different angles in MultiView Mode

#45 bruvellu closed 5 years ago
2

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