SBRG bigg_models issues

SBRG / bigg_models

The BiGG Models website server

http://bigg.ucsd.edu

Other

77 stars 18 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

Flux Rate Units

#422 kelseyaw opened 6 months ago
0
Chemical formula: C24H38O4) I am using does not have a corresponding BIGG ID, please help me!!!!

#421 microbial-cookie opened 8 months ago
1
add missing extrenal database links to orphan metabolites

#420 eladnoor opened 8 months ago
0
Erraneous reaction?

#419 IndrekM80 opened 9 months ago
0
couldn't see Escher Map

#418 898289687 opened 10 months ago
0
No PMID

#417 hui-shi opened 1 year ago
0
Wrong metabolite name

#416 smoretti opened 1 year ago
0
Adding models

#415 enesftezcan opened 1 year ago
0
Identifiers from other databases require update

#414 GwennyGit opened 1 year ago
0
Need updated metanetX ID

#413 JamesPino opened 1 year ago
0
memote tests fail for synechococcus

#412 vladpetyuk opened 1 year ago
0
Wrong name for fdxr_22?

#411 smoretti opened 1 year ago
0
Entry completeness

#410 internEVbiotech opened 2 years ago
0
Error on this page

#409 raven44099 opened 2 years ago
0
BiGG model database found in the BiGG Models API does not contain BiGG identifiers

#408 wtscott31 opened 2 years ago
0
Very low and high values in metabolite to reaction matrix

#407 fratajcz opened 2 years ago
0
organism detail not shown (iRC1080)

#406 carissableker opened 2 years ago
0
The formula of this metabolite seems to be wrong.

#405 ithiele opened 2 years ago
0
List of GPRs for the universal_model.json and won't load into cobrapy

#404 bananabenana closed 2 years ago
2
Latest database dump is not available

#403 famosab opened 2 years ago
1
Name of the reaction is wrong

#402 Ilchaffurin opened 2 years ago
0
Missing metabolites from SNM3 medium

#401 JosuaCarl opened 2 years ago
0
HMDB identifiers problem

#400 adugourd opened 2 years ago
0
Reaction PRASCSi H+ missing

#399 JosuaCarl opened 2 years ago
0
Charge lipo1_24_BS, lipo2_24_BS, lipo3_24_BS and lipo4_24_BS

#398 JosuaCarl opened 2 years ago
0
Consistency in iIT341

#397 sowmyamanojna opened 2 years ago
0
Wrong InchiKey NH3

#396 JosuaCarl opened 2 years ago
0
Genome assemblies for some models have been removed from NCBI

#395 jonrkarr opened 2 years ago
2
iMM1865: Mus musculus metabolic model

#394 SaidaKhodaee closed 2 years ago
0
Reference is missing for `iJN1463`

#393 jonrkarr opened 2 years ago
0
Reference are missing for `iIS312`, `iIS312_Amastigote`, `iIS312_Epimastigote`, `iIS312_Trypomastigote`

#392 jonrkarr opened 2 years ago
0
Reference is missing for `iCN900`

#391 jonrkarr opened 2 years ago
0
3 metabolites in `iYS1720` have invalid chemical formulae and incorrect charges

#390 jonrkarr opened 2 years ago
0
`iSynCJ816` is not valid SBML due to no flux objective and reaction with no reactants or products

#389 jonrkarr opened 2 years ago
0
`iRC1080` is not valid SBML due to no flux objective

#388 jonrkarr opened 2 years ago
0
`iMM1415` is not valid SBML due to no flux objective

#387 jonrkarr opened 2 years ago
1
The optimal solution of `iCN900` is objective = 0

#386 jonrkarr opened 2 years ago
0
`iAT_PLT_636` is not valid SBML due to no flux objective

#385 jonrkarr opened 2 years ago
1
`iCN718` is not valid SBML due to reaction with no reactants or products

#384 jonrkarr opened 2 years ago
3
I think it is 3-phosphate not 5-phosphate

#383 naxhie opened 3 years ago
0
To get metabolite details

#382 codewarrior2000 opened 3 years ago
0
AHSERL3 Unbalanced

#381 mneal98 opened 3 years ago
0
Model name error

#380 yut8920 opened 3 years ago
0
IDOND2 Descriptive name has a typo: iNdonate

#379 glucksfall opened 3 years ago
0
UDCPAT and OALT seem to describe the same reaction

#378 Finnem opened 3 years ago
0
3?,12?-dihydroxy-7-oxo-5?-cholan-24-oate (aka dhcholn) real name?

#377 smoretti opened 3 years ago
1
ibtol (Isobutanol) is C5 but should be C4

#376 smoretti opened 3 years ago
0
Non-unique gene names

#375 Hrovatin closed 3 years ago
6
Universal (JSON) model does not follow COBRA JSON schema

#374 bdelepine opened 3 years ago
4
Visualization does not work

#373 carlospirola opened 3 years ago
0