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bigg_models
The BiGG Models website server
http://bigg.ucsd.edu
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Wrong formula in ibtol?
#372
smoretti
opened
3 years ago
0
Misspelling of enzyme name: aceyltransferase
#371
taylordm
opened
3 years ago
0
No landing page on Publication PMID link
#370
mrivas
opened
4 years ago
0
Wrong GPR in OAADC of Pseudomonas putida KT2440 model iJN1463
#369
Midnighter
opened
4 years ago
0
Annotating models with the genome identifier
#368
Midnighter
opened
4 years ago
1
h_c coefficient
#367
stelviopas
opened
4 years ago
0
Several BiGG SBML models are invalid and cannot be easily read
#366
smoretti
opened
4 years ago
4
Pseudomonas putida KT2440 model iJN1463 publication missing
#365
wnkc
opened
4 years ago
2
There is an updated reference genome sequence for B REL606 strain in NCBI
#364
forestrywhale
closed
4 years ago
0
Metabolite annotation with InChI Key
#363
Midnighter
opened
4 years ago
4
listOfGroups missing in all models
#362
Ghabry
opened
4 years ago
9
Adding model of Methylococcus capsulatus Bath to BiGG
#361
ChristianLieven
opened
4 years ago
0
Error in BiGG Reaction OAADC stoichiometry
#360
rohanmaddamsetti
closed
4 years ago
0
newlines in two metabolite records
#359
mostueve
opened
4 years ago
3
Dumps seem to have moved/Link not working
#358
mephenor
closed
4 years ago
1
python 3.7, upgraded dependencies, fixes for 1.6 beta
#357
zakandrewking
closed
4 years ago
0
How to annotate Mouse RNA seq assembly data
#356
nbutyrate
closed
4 years ago
1
Known issues in BiGG 1.6 Beta
#355
zakandrewking
closed
4 years ago
11
Call for feedback: New lipid naming convention
#354
zakandrewking
opened
4 years ago
17
Multistrain download
#353
zakandrewking
closed
4 years ago
0
permission to put BiGG IDs for metabolites in Wikidata
#352
egonw
opened
4 years ago
5
Has the transport protein for ACtm been identified?
#351
djinnome
opened
4 years ago
0
look for KEGG Glycan in metanetx
#350
zakandrewking
closed
4 years ago
0
Upgrade to Escher 1.7
#349
zakandrewking
closed
4 years ago
0
small fixes
#348
zakandrewking
closed
4 years ago
0
Add Inchi keys from metanetx as external database links
#347
zakandrewking
closed
4 years ago
0
Filter multistrain models
#346
zakandrewking
closed
4 years ago
0
File not found Error when accessing the Escher Map for model iMM904
#345
draeger
closed
4 years ago
0
errors in core model reaction annotations
#344
Karrenbelt
opened
4 years ago
0
Should only have 1 proton translocation
#343
he-hai
opened
5 years ago
0
Sorting Behavior when clicking on "Name" column
#342
z-haiman
closed
4 years ago
0
Issues with information in synonym table
#341
matthiaskoenig
opened
5 years ago
0
Reactome database links do not start with https://identifiers.org
#340
matthiaskoenig
closed
4 years ago
0
"open map in a new window" 404
#339
EBaalhuis
closed
4 years ago
0
Update data_access.html
#338
npusarla
closed
5 years ago
0
bigg models don't have an SBO ID
#337
npusarla
closed
4 years ago
6
use light intensity as a constraint to predict the maximum growth
#336
math248
closed
5 years ago
4
Metabolite ID in BiGG Database
#335
jyotshana4
closed
5 years ago
1
No `fbc:name` available for `geneProduct`
#334
phantomas1234
opened
5 years ago
0
SBML of iAT_PLT_636 misses FluxObjectives
#333
matthiaskoenig
closed
5 years ago
6
Notes in geneProductAssociation causes an error for BiGG but not SBML
#332
kcorreia
opened
5 years ago
2
Invalid entity identifier G10504
#331
glucksfall
closed
4 years ago
1
HMDB ID for f6p
#330
schultzdre
opened
5 years ago
1
HTTPS for bigg.ucsd.edu
#329
kvikshaug
opened
5 years ago
3
If models have reaction or metabolite IDs longer than 256 characters, the validator gives an unclear error message
#328
zakandrewking
closed
5 years ago
0
Abandoning Jobs
#327
npusarla
closed
5 years ago
0
metabolite mapping
#326
jtyurkovich
opened
5 years ago
0
Retrieve database links for all gene IDs in a BiGG model for ID mapping
#325
janstrauss1
opened
5 years ago
2
Discrepancy in E. Coli core
#324
tjclement
closed
5 years ago
5
Make a potential refresh button
#323
npusarla
closed
5 years ago
0
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