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VEuPathDB
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EdaSubsettingService
A REST service to provide data and subsetting in the Exploratory Data Analysis Workspace
Apache License 2.0
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EDA Optimization Tuning (Phase 2)
#91
dmgaldi
opened
1 year ago
0
Introduce concurrency to file-based subsetting
#90
dmgaldi
closed
1 year ago
0
Add a map-reduce entity count endpoint to Subsetting service
#89
dmgaldi
closed
1 year ago
0
Add option in tabular endpoint to return full set w/subset membership indicator column
#88
ryanrdoherty
opened
1 year ago
0
Deploy map-reduce subsetting to QA
#87
dmgaldi
opened
1 year ago
3
Update study files to use flat directory structure
#86
dmgaldi
closed
1 year ago
0
Use resolved schema rather than always app schema to generate sql
#85
ryanrdoherty
closed
1 year ago
1
Add variable to environment var to control release of new subsetting
#84
dmgaldi
closed
1 year ago
0
Fix subsetting metric paths
#83
dmgaldi
closed
1 year ago
2
Subsetting Histogram: respect flag for imputing zeroes
#82
d-callan
opened
1 year ago
2
Server 500 error in download modal
#81
jernestmyers
closed
10 months ago
2
Updated integ tests and incorporated new subsetting changes
#79
dmgaldi
closed
1 year ago
0
Add regression tests comparing map-reduce to db solution
#77
dmgaldi
closed
1 year ago
0
Enforce subsetting requests are for VarWithValues and not categories
#76
dmgaldi
closed
1 year ago
0
Heap dump on OOM instead of core dump
#75
dmgaldi
closed
1 year ago
1
Subsetting results table: Remove preview in download modal if none available?
#78
asizemore
closed
1 year ago
18
Wire up binary files parameter to service
#74
dmgaldi
closed
2 years ago
0
Bug in Browse & subset histogram binning
#80
danicahelb
opened
2 years ago
2
Mbio: Some taxa vars give 400 on browse and subset
#72
asizemore
closed
1 year ago
2
Bin widths should be recalculated based on data range selected
#71
danicahelb
opened
2 years ago
1
Integrate user datasets, modernize build, dependency upgrades
#70
ryanrdoherty
closed
2 years ago
0
ClassCastException on distribution page
#69
ryanrdoherty
closed
2 years ago
1
Type checking in float/int distribution bin configs is broken
#68
ryanrdoherty
closed
2 years ago
2
EDA Optimization (Phase 1)
#67
dmgaldi
closed
1 year ago
0
EDA - for multi-valued terms, use a pipe between values
#66
danicahelb
opened
2 years ago
0
Test PR
#65
dmgaldi
closed
2 years ago
0
Backend: include "scale" annotation
#64
danicahelb
closed
12 months ago
7
Collections api
#63
ryanrdoherty
closed
2 years ago
1
Upgrade core lib to latest version
#62
dmgaldi
closed
2 years ago
0
Upgrade container core and EdaCommon
#61
dmgaldi
closed
2 years ago
0
Add Collections API and read data from DB
#60
ryanrdoherty
closed
2 years ago
0
Add one-to-many flag and read from DB
#59
ryanrdoherty
closed
2 years ago
0
Tabular endpoint is slow to respond
#58
dmfalke
opened
2 years ago
2
Backend: Introduce a Collection Tree
#57
d-callan
closed
2 years ago
0
Subsetting service: DIY: will need to read from the new views in database
#55
aurreco-uga
closed
2 years ago
2
Variable distribution request with too small bin width blows out system memory
#53
chowington
closed
2 years ago
5
Remove time from date variables with no times in subset modal download files
#56
SheenaTomko
closed
2 years ago
2
Use distinct names for the various subset results downloads
#54
danicahelb
closed
2 years ago
2
Fix the column headers for the primary and foreign keys in the subset modal download to match bulk downloads
#51
SheenaTomko
closed
2 years ago
5
Update the column headers for the subset modal download files
#52
SheenaTomko
closed
2 years ago
5
Add version of tabular endpoint that accepts url-encoded-form content type and sends attachment header
#50
ryanrdoherty
closed
2 years ago
0
Add JVM Stats to prometheus.
#49
Foxcapades
opened
2 years ago
0
Move metadata cache clearing endpoint so authentication not required
#48
ryanrdoherty
closed
2 years ago
0
dont use studyiddatasetid table
#46
d-callan
closed
2 years ago
0
factor distribution generation code and call at fgputil
#45
ryanrdoherty
closed
2 years ago
0
Add "external" header option for tabular endpoint
#44
ryanrdoherty
closed
2 years ago
2
Change N/A value to 'N/A' string (from null)
#42
ryanrdoherty
closed
2 years ago
0
Fill 'N/A' for missing distribution stats when subset is size 0
#41
ryanrdoherty
closed
2 years ago
0
Subsetting: No stats and no message in histograms where there is no data available
#40
d-callan
closed
2 years ago
10
Date histogram on subsetting tab gives 500 error if all data has been filtered out
#39
SheenaTomko
closed
2 years ago
7
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