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amc-heme
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scExploreR
Shiny app for single cell omics data visualization
https://amc-heme.github.io/scExploreR/
MIT License
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Add human readable suffix to DotPlots
#299
agillen
opened
4 days ago
2
263 object dictionary metadata description cards have blank headers when metadata labels are not defined in the config app
#300
srg0502
closed
2 days ago
0
Object dictionary: metadata description cards have blank headers when metadata labels are not defined in the config app
#263
wish1832
closed
2 days ago
1
Subsetting drops all cells with NA in any metadata column
#65
agillen
opened
2 years ago
7
Merge update to include feature sorting
#298
agillen
closed
4 days ago
0
Sort plots by feature expression
#288
wish1832
closed
4 days ago
1
Sort plots by feature expression
#297
wish1832
closed
4 days ago
0
update rudimentary_auth branch with hackathon pulls
#296
agillen
closed
4 days ago
0
Config app crashes when pressing "Load config file" when no config path is defined
#241
wish1832
closed
1 week ago
1
241 config app crashes when pressing load config file when no config path is defined
#291
jairav
closed
1 week ago
0
Error when making blended feature plot
#280
wish1832
closed
1 week ago
2
remove assay prefix to feature names in feature sorting drop down
#295
srg0502
closed
1 week ago
0
update to feature expression sorting feature
#294
srg0502
closed
1 week ago
0
UI added for sort by feature expression menu
#293
srg0502
closed
1 week ago
0
Features do not auto-populate in Subset Options for DE/Marker Selection
#292
jairav
opened
2 weeks ago
0
Inconsistent behavior on "Save Config File" when config_path=NULL
#290
jairav
opened
2 weeks ago
0
App crashes when switching between two objects, if a feature not in the second object is selected
#115
wish1832
opened
1 year ago
2
Documentation for Object Guidelines
#277
wish1832
opened
1 month ago
1
Convert UI to bslib
#289
wish1832
opened
3 weeks ago
0
Sort metadata by factor levels (if present) in all menus
#286
wish1832
opened
1 month ago
0
Infinite loop in plots tab
#266
wish1832
opened
1 month ago
3
Units on expression plot axes aren't clear
#287
wish1832
opened
1 month ago
0
scExploreR errors when trying to install Bioconductor dependencies
#256
jairav
closed
1 month ago
1
Update README.md
#284
jairav
closed
1 month ago
0
New subset interface: categorical metadata values are unsorted
#235
wish1832
closed
1 month ago
2
categorical subset values ordered alphanumerically or levels called i…
#285
srg0502
closed
1 month ago
0
Document or improve interface for filtering DGE table results
#273
wish1832
opened
1 month ago
3
Disable accept subset button while filters are being edited
#265
wish1832
closed
1 month ago
2
Gene correlation issue
#258
sheltoia
closed
1 month ago
3
disabled correlation tab #258
#283
srg0502
closed
1 month ago
0
Choose plot size in inches and resolution instead of pixels
#282
wish1832
opened
1 month ago
0
Notifications when loading config file
#149
wish1832
opened
1 year ago
2
Differential gene expression pickerInput menus are cut off
#147
wish1832
opened
1 year ago
1
Config app safeguards
#146
wish1832
closed
1 month ago
2
Set up "lite" version without DGE via config app
#145
wish1832
opened
1 year ago
0
Access blended feature plots via a separate switch
#139
wish1832
opened
1 year ago
1
Subset interface with categorical metadata: do not autofill variable
#281
wish1832
opened
1 month ago
0
DGE Tab: column names of table downloaded are still Presto defaults
#136
wish1832
opened
1 year ago
0
DGE tab: add reduction choice to DimPlot
#135
wish1832
opened
1 year ago
0
Violin Plots: Change "Metadata to Group by" to "Metadata for Primary Grouping"
#131
wish1832
opened
1 year ago
0
Feature Plots: custom titles do not display appropriately when blend is enabled
#128
wish1832
opened
1 year ago
1
Custom title for scatterplots
#126
wish1832
opened
1 year ago
1
Adjust Size of labels in UMAP, Feature plots
#123
wish1832
opened
1 year ago
1
Ability to split by projections
#122
wish1832
closed
1 month ago
1
Display dataset name in top bar
#121
agillen
opened
1 year ago
0
glued metadata columns appear to cause trouble with config and Rmd
#120
agillen
opened
1 year ago
0
Metaclustering in Plots Tab
#118
wish1832
opened
1 year ago
0
Use YAML more extensively?
#105
agillen
closed
1 month ago
4
Add subset information to auto-dictionary.rmd
#102
wish1832
closed
1 month ago
1
DGE with gene signatures
#101
wish1832
closed
1 month ago
1
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