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broadinstitute
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grit-benchmark
Benchmarking a metric used to evaluate a perturbation strength
BSD 3-Clause "New" or "Revised" License
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reproducing with updated dependencies
#36
alxndrkalinin
closed
1 year ago
3
missing activities results file for perturb-seq
#35
alxndrkalinin
closed
1 year ago
2
cannot install using environment.yml
#34
alxndrkalinin
opened
1 year ago
5
Copying files that were sitting around in EFS
#33
shntnu
opened
2 years ago
0
Adding grit deconstruction data
#32
gwaybio
closed
2 years ago
0
Fixing gwaygenomics/grit-benchmark#1
#31
gwaybio
closed
3 years ago
0
Add grit aggregation
#30
hillsbury
closed
3 years ago
2
potentially mislabelled cell lines
#29
hillsbury
opened
3 years ago
0
Reprocess all single cells
#28
gwaybio
closed
3 years ago
0
Understanding Grit
#25
shntnu
closed
3 years ago
0
R code to test out grit
#24
shntnu
closed
2 years ago
2
Figure 1 discussions
#23
gwaybio
opened
3 years ago
2
Comparing mean vs. median in computing summary
#22
gwaybio
closed
3 years ago
0
Updating single cell grit calculation
#21
gwaybio
closed
3 years ago
0
Adding figure 3
#20
gwaybio
closed
3 years ago
0
Increase figure 1A resolution
#19
gwaybio
closed
3 years ago
0
Compiling Figure 1
#18
gwaybio
closed
3 years ago
1
Exploring strawman bad predictions and updating permutation
#17
gwaybio
closed
3 years ago
0
Add exploratory analysis of replicate cor / control cor
#16
gwaybio
closed
3 years ago
0
Updating intro figures
#15
gwaybio
closed
3 years ago
0
Add permuted grit and control titration analysis
#14
gwaybio
closed
3 years ago
0
Adding cell health single cell analyses
#13
gwaybio
closed
3 years ago
0
Grit should handle multiple groupings
#12
gwaybio
opened
3 years ago
0
Checking if plate normalization impacts grit
#11
gwaybio
closed
3 years ago
0
Perturbseq grit vs. perturbseq expression
#10
gwaybio
opened
3 years ago
0
Update perturbseq processing
#9
gwaybio
closed
3 years ago
0
MP-Value vs. Grit
#8
gwaybio
opened
3 years ago
5
Adding replicate reproducibility
#7
gwaybio
closed
3 years ago
0
Comparing cell health grit to mp value and adding compartment tests
#6
gwaybio
closed
3 years ago
0
Adding Readme and workflow figures
#5
gwaybio
closed
3 years ago
0
Adding perturb-seq grit application
#4
gwaybio
closed
3 years ago
0
Moving cell health to it's own subfolder
#3
gwaybio
closed
3 years ago
0
Compare cell health metrics [Grit vs. CERES]
#2
gwaybio
closed
3 years ago
0
Cell health: CERES vs. Grit
#1
jt-neal
opened
3 years ago
9