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cbielow
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PTXQC
A Quality Control (QC) pipeline for Proteomics (PTX) results generated by MaxQuant
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[IDEA] isotope dot product
#137
cbielow
opened
1 month ago
0
Release 1.1.1
#136
cbielow
closed
5 months ago
0
Use named `guide` argument
#135
teunbrand
closed
7 months ago
2
new metric: frequencies of variable mods
#134
cbielow
closed
8 months ago
0
[v1.0.17] update rmzqc
#132
cbielow
closed
9 months ago
0
fixes #130 (UTF-8 BOM)
#131
cbielow
closed
1 year ago
0
Error in `$<-.data.frame`(`*tmp*`, page, value = 1) : replacement has 1 row, data has 0 [UTF-8 BOM issue]
#130
GeorgTascher
closed
1 year ago
5
qualUniform(x$ratio, x$count)
#129
mthang
closed
9 months ago
2
Error in qualUniform(x$topN): Error: qualUniform() received negative or missing data
#128
eschen42
closed
1 year ago
14
Contaminant recognition
#127
ofleitas
closed
9 months ago
2
Wrong locale only reported when evidence.txt is present
#126
cbielow
opened
1 year ago
0
Refactor to use rmzqc package
#125
cbielow
closed
1 year ago
0
use minmum from data for reporter ion plot
#124
cbielow
closed
1 year ago
0
[FEATURE] improve TMT/iTRAQ reporter intensity plot
#123
cbielow
closed
1 year ago
1
Add missing option
#122
czanetti
closed
1 year ago
0
Error in qualUniform(x$ratio, x$count) : Error: qualUniform() received negative or missing data!
#121
Maithy15
closed
1 year ago
3
Release preparation for 1.0.14
#120
cbielow
closed
1 year ago
0
MSMSScans TopNoverN plot shows equally high bars for all 'N'
#119
cbielow
closed
1 year ago
6
Report creation fails if very old PTX-QC version was run on the same dataset
#118
cbielow
closed
1 year ago
0
Mq 21 support
#117
cbielow
closed
2 years ago
0
Remove kableExtra package dependency
#116
cbielow
closed
2 years ago
0
Quitting from R template and can't generate template file
#115
yuha6189
opened
2 years ago
1
fix request for mqpar.xml (for mzQC file) when processing mzTab
#114
cbielow
closed
2 years ago
0
Release of version 1.0.12
#113
cbielow
closed
2 years ago
0
fixes #110 (only a single MSMS scan per Raw file)
#112
cbielow
closed
2 years ago
0
Fix legends
#111
cbielow
closed
2 years ago
0
Report generation fails
#110
cbielow
closed
2 years ago
3
Documentation and cosmetic fixes
#109
cbielow
closed
2 years ago
0
EVD: Top5 contaminants
#108
angelawu-wustl
closed
2 years ago
6
fix error when running exotic msmsscans file, where for any raw file,…
#107
cbielow
closed
2 years ago
0
PTXQC with MaxQuant results from timsTOF data
#106
bidiman
opened
2 years ago
1
mzQC format support
#105
cbielow
closed
3 years ago
0
missed cleavages from evidence.txt
#104
pscheil
closed
3 years ago
0
'match' requires vector arguments
#103
mtinti
closed
3 years ago
9
Decoy distribution is missing MSMS mass error plot
#102
cbielow
closed
3 years ago
0
PAR: parameters is missing important fields
#101
cbielow
closed
3 years ago
0
combined PR for MBR-fix and locale-feature
#100
cbielow
closed
3 years ago
0
Check current system locale (dot vs. comma. as decimal separator)
#99
cbielow
closed
3 years ago
0
HTML report checks MaxQuant locale settings (. vs ,)
#98
cbielow
closed
3 years ago
0
MBR metrics are missing
#97
cbielow
closed
3 years ago
1
stop createReport if charge is negative, write ggText in boxplotCompa…
#96
pscheil
closed
3 years ago
0
Error with pandoc 2.12
#95
jpfeuffer
closed
9 months ago
2
createReport should write a log file
#94
cbielow
closed
3 years ago
1
PTXQC issue: hangs when Creating Report file
#93
Alxcho
closed
3 years ago
3
License
#92
fabianegli
closed
3 years ago
5
Wrong score for MSMSScans Intensity
#91
cbielow
closed
3 years ago
0
MissedCleavages plot missing
#90
cbielow
closed
3 years ago
12
Error pandoc
#89
DaliJarboui
closed
9 months ago
1
mzQC support
#88
cbielow
closed
3 years ago
2
include createYaml function into createReport()
#87
koehlek99
closed
3 years ago
2
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