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eggnogdb
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eggnog-mapper
Fast genome-wide functional annotation through orthology assignment
http://eggnog-mapper.embl.de
GNU Affero General Public License v3.0
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Are the online resources down?
#488
adrienchaton
closed
10 months ago
2
Which version of pfam, kegg, cazy etc is used?
#487
yeastbeast
opened
10 months ago
1
Assign queries without DIAMOND hit to eggNOG groups using HMM
#486
sgarciah12
opened
11 months ago
1
Local vs. online resource
#485
liamfriar
closed
9 months ago
2
Taxonomic table for extraction of certain levels
#484
ts-dangelo
opened
11 months ago
1
extract best OG (v2.1.12)
#483
algrgr
opened
12 months ago
4
Error: annotation went wrong for pfam alignment in parallel
#482
zhaoc1
closed
12 months ago
7
There was an error retrieving eggnog-mapper DB data: disk I/O error
#481
CoderWenmingxing
opened
1 year ago
3
the status showed "Done", but no result can be downloaded, using online eggnog
#480
sqwwww
opened
1 year ago
4
Issue when using mmseqs instead of diamond: "Error running 'mmseqs search': - Aminoacid"
#479
plaquette
closed
1 year ago
2
eggnog-mapper stuck in pfam annotation
#478
x-rv
opened
1 year ago
1
number of queries scanned very different than number of proteins in input fasta
#477
ecpierce
opened
1 year ago
1
UnicodeEncodeError running emapper.py
#476
kate-stankiewicz
opened
1 year ago
1
Problem running emapper.py
#475
ZilongXu
opened
1 year ago
1
Installation not working on ARM based mac
#474
stephanbitterwolf
opened
1 year ago
8
emapper running forever
#473
rsiani
closed
1 year ago
6
problem running emapper.py
#472
yeon-y
closed
1 year ago
2
seed orthologs reported for only 500 queries at a time
#471
lzholl
opened
1 year ago
3
can't download HMMs
#470
185971
opened
1 year ago
5
Why am I getting more CDs with KO numbers when using the tax scope "bacteria" compared to without the tax scope "bacteria"?
#469
Julboteroc
opened
1 year ago
4
which database does it use?
#468
tzaquin
opened
1 year ago
1
Unrecognized tax ID, tax name or tax_scope mode: 'auto'
#467
Rhia15
opened
1 year ago
1
How long it takes to have the result?
#466
arminmm91
opened
1 year ago
5
Problems about using eggNOG-mapper web
#465
YueeeXiao
closed
1 year ago
3
Can i use eggnog to predict both orthologues and paralogues, or orthologues only?
#464
timeresistance1996
opened
1 year ago
2
sensmode arguments don't work
#463
nashanghenzan
closed
1 year ago
1
Question – multiple KO IDs for one gene
#462
Calvin2077
opened
1 year ago
4
Is it possible to increase the # of sequences/bp limit on the web?
#461
davecarlon
opened
1 year ago
1
get parent og from og
#460
matthpich
closed
1 year ago
3
Missing GO terms
#459
snehakhokhali
opened
1 year ago
13
problem with eggNOG mapper
#458
DinaNahhas
opened
1 year ago
3
--excluded_taxa not working
#457
albidgy
closed
1 year ago
2
emapper.py idle
#456
algrgr
opened
1 year ago
7
problem with decorating the gff file
#455
feudalab
closed
1 year ago
5
decorate_gff_files
#454
nguyenjn1906
closed
1 year ago
5
emapper.py (hmmer) sleeps on cluster
#453
carlosj-rr
opened
1 year ago
15
Too many KO id in one reads in emapper.annotations
#452
Ben-41
closed
1 year ago
2
Question on current taxon databases
#451
charlesfeigin
closed
1 year ago
2
Error running diamond: operable program or batch file.
#450
leonhardt913
opened
1 year ago
12
How is eggnog-mapper calling preferred_name?
#449
morgansobol
opened
1 year ago
4
Error running 'mmseqs search'
#448
Ben-41
closed
1 year ago
27
the right way to use hmmer search
#447
Saber39
closed
1 year ago
9
missing gene in annotation file compare to seed_ortholog
#446
mariabernard
closed
1 year ago
4
Update Diamond
#445
BrunoKVI
opened
1 year ago
1
Different results when annotating a large protein set at once vs splitting the input into multiple files
#444
cschu
opened
1 year ago
9
unknown gene function clarification: S vs -
#443
franciscozorrilla
closed
1 year ago
1
502 Bad Gateway error when accessing Eggnog-mapper web
#442
gdalba
closed
1 year ago
5
Inconsistent result between EggNOG database 5.0 and eggnog-mapper
#441
ucabuk
opened
1 year ago
5
Renaming protein headers with eggnog gff information.
#440
nitinra
opened
1 year ago
1
Should an error be thrown when provided compressed files?
#439
rhysnewell
closed
1 year ago
4
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