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Indigo
Universal cheminformatics toolkit, utilities and database search tools
http://lifescience.opensource.epam.com
Apache License 2.0
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Backmerge: #1773 Save to CDX converts plus and arrow into lone pair and line
#1888
AliaksandrDziarkach
closed
3 months ago
0
#1773 Save to CDX converts plus and arrow into lone pair and line
#1887
AliaksandrDziarkach
closed
3 months ago
0
CDX: Dashed bonds type from ChemDraw are changed to Single Down bonds
#1886
NadezhdaPeskun
closed
3 months ago
1
When opening a FASTA file, an error appears in the Console DevTool
#1885
ViktoriaTkacheva
closed
3 months ago
1
Segfault while rebuilding index on molfile using bingo.molecule type
#1884
amhuhn2
opened
3 months ago
0
Macro: When opening a seq file with peptides via RNA or DNA, an error appears in the Console DevTool
#1883
ViktoriaTkacheva
closed
3 months ago
2
Bump bug_report.md
#1882
AlexeyGirin
closed
3 months ago
0
Macro: Cannot load Peptides from our Library that are not connected by bonds using FASTA file
#1881
NadezhdaPeskun
closed
3 months ago
1
#1826 - CombinedComparator is created. Added builders for comparators.
#1880
uladkaminski
closed
3 months ago
0
indigo dotNet can not load version V3000 molfile which contains cis/trans double bond
#1879
jank9201
closed
1 month ago
2
The structure saved in CML format does not open
#1878
Zhirnoff
closed
1 month ago
4
Macro: V3000 export causes two sequences pile one above other if opened in another sketcher
#1877
AlexeyGirin
closed
1 month ago
2
Backmerge: #1822 Fasta: All Peptides should be saved to FASTA format and (use N/X symbol as well)
#1876
even1024
closed
3 months ago
0
Backmerge: #1161 - bingo unable to index on sql server
#1875
AlexanderSavelyev
closed
3 months ago
0
#1161 - bingo unable to index on sql server
#1874
AlexanderSavelyev
closed
3 months ago
0
Backmerge: #1852 Macro(Export FASTA): The header 'Sequence N' is missing, and '>' symbol is located at end of the first sequence (#1867)
#1873
even1024
closed
3 months ago
0
Substructure matcher finds implicit hydrogens as atoms
#1872
AlexanderSavelyev
opened
3 months ago
0
Bump to version 1.9.0-rc.2
#1871
even1024
closed
3 months ago
1
System changed atom and label positions after save to CDX
#1870
AlexeyGirin
opened
3 months ago
0
Backmerge: #1851 Macro(Import FASTA): The ';' symbol is not recognized as a comment
#1869
even1024
closed
3 months ago
0
#1822 Fasta: All Peptides should be saved to FASTA format and (use N/X symbol as well).
#1868
even1024
closed
3 months ago
0
#1852 Macro(Export FASTA): The header 'Sequence N' is missing, and '>' symbol is located at end of the first sequence
#1867
even1024
closed
3 months ago
0
Backmerge: #1777 Some bonds don't display correctly in ChemDraw when opening a saved Ketcher CDX file.
#1866
AliaksandrDziarkach
closed
3 months ago
0
#1777 Some bonds don't display correctly in ChemDraw when opening a saved Ketcher CDX file.
#1865
AliaksandrDziarkach
closed
3 months ago
0
#1852 Macro(Export FASTA): The header 'Sequence N' is missing, and '>' symbol is located at end of the first sequence
#1864
even1024
closed
3 months ago
0
#1851 Macro(Import FASTA): The ';' symbol is not recognized as a comment
#1863
even1024
closed
3 months ago
0
Backmerge: #1849 Macro(Import FASTA): The ' * ' symbol occurring between two letters is not recognized as a break in peptide chain
#1862
even1024
closed
3 months ago
0
Backmerge: #1850 Macro(Import FASTA): The '>' symbol is not recognized as indicating a new sequence (#1858)
#1861
even1024
closed
3 months ago
0
Backmerge: #1802 bad performance in WASM during the parsing of large sequences
#1860
even1024
closed
3 months ago
0
#1849 Macro(Import FASTA): The ' * ' symbol occurring between two letters is not recognized as a break in peptide chain
#1859
even1024
closed
3 months ago
0
#1850 Macro(Import FASTA): The '>' symbol is not recognized as indicating a new sequence
#1858
even1024
closed
3 months ago
0
Move all the logic from indigo_api.py to Indigo library
#1857
even1024
opened
3 months ago
0
rendering ketcher json format in Indigo python
#1856
registerme1963
opened
3 months ago
0
Atom Query feature export: System creates invalid mol file if custom query present - export to Mol file/RXN V2000/SDF V2000
#1855
AlexeyGirin
opened
3 months ago
1
Error "process is not defined" while try to open mol file after switching from Macro and Undo/Redo actions.
#1854
NadezhdaPeskun
closed
3 months ago
1
R groups from mol/Ket files of Macro mode are broken in the Micro mode.
#1853
NadezhdaPeskun
closed
3 months ago
1
Macro(Export FASTA): The header 'Sequence N' is missing, and '>' symbol is located at end of the first sequence
#1852
Zhirnoff
closed
3 months ago
2
Macro(Import FASTA): The ';' symbol is not recognized as a comment
#1851
Zhirnoff
closed
3 months ago
1
Macro(Import FASTA): The '>' symbol is not recognized as indicating a new sequence
#1850
Zhirnoff
closed
3 months ago
1
Macro(Import FASTA): The ' * ' symbol occurring between two letters is not recognized as a break in peptide chain
#1849
Zhirnoff
closed
3 months ago
1
Cannot save FASTA using the Remote mode
#1848
NadezhdaPeskun
closed
3 months ago
3
Backmerge: #1774 Save to CDX converts aromatic benzene ring to dashed ring
#1847
AliaksandrDziarkach
closed
3 months ago
0
#1774 Save to CDX converts aromatic benzene ring to dashed ring
#1846
AliaksandrDziarkach
closed
3 months ago
0
#1802 bad performance in WASM during the parsing of large sequences
#1845
even1024
closed
3 months ago
0
Implement GenBank/GenPept sequences import
#1844
even1024
closed
2 months ago
0
FASTA export: 80 chars limit
#1843
even1024
closed
2 months ago
1
Backmerge: #1773 Save to CDX converts plus and arrow into lone pair and line
#1842
AliaksandrDziarkach
closed
3 months ago
0
#1773 Save to CDX converts plus and arrow into lone pair and line
#1841
AliaksandrDziarkach
closed
3 months ago
0
FASTA: Add warning about lost some information (Phosphates) while we save DNA/RNA nucleotide to FASTA.
#1840
NadezhdaPeskun
closed
3 months ago
2
We cannot open usual FASTA file and switch to Micromolecules mode, Application hangs.
#1839
NadezhdaPeskun
closed
3 months ago
2
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