issues
search
epam
/
Indigo
Universal cheminformatics toolkit, utilities and database search tools
http://lifescience.opensource.epam.com
Apache License 2.0
292
stars
100
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Backmerge: #1852 Macro(Export FASTA): The header 'Sequence N' is missing, and '>' symbol is located at end of the first sequence (#1867)
#1873
even1024
closed
3 months ago
0
Substructure matcher finds implicit hydrogens as atoms
#1872
AlexanderSavelyev
opened
3 months ago
0
Bump to version 1.9.0-rc.2
#1871
even1024
closed
3 months ago
1
System changed atom and label positions after save to CDX
#1870
AlexeyGirin
opened
3 months ago
0
Backmerge: #1851 Macro(Import FASTA): The ';' symbol is not recognized as a comment
#1869
even1024
closed
3 months ago
0
#1822 Fasta: All Peptides should be saved to FASTA format and (use N/X symbol as well).
#1868
even1024
closed
3 months ago
0
#1852 Macro(Export FASTA): The header 'Sequence N' is missing, and '>' symbol is located at end of the first sequence
#1867
even1024
closed
3 months ago
0
Backmerge: #1777 Some bonds don't display correctly in ChemDraw when opening a saved Ketcher CDX file.
#1866
AliaksandrDziarkach
closed
3 months ago
0
#1777 Some bonds don't display correctly in ChemDraw when opening a saved Ketcher CDX file.
#1865
AliaksandrDziarkach
closed
3 months ago
0
#1852 Macro(Export FASTA): The header 'Sequence N' is missing, and '>' symbol is located at end of the first sequence
#1864
even1024
closed
3 months ago
0
#1851 Macro(Import FASTA): The ';' symbol is not recognized as a comment
#1863
even1024
closed
3 months ago
0
Backmerge: #1849 Macro(Import FASTA): The ' * ' symbol occurring between two letters is not recognized as a break in peptide chain
#1862
even1024
closed
3 months ago
0
Backmerge: #1850 Macro(Import FASTA): The '>' symbol is not recognized as indicating a new sequence (#1858)
#1861
even1024
closed
3 months ago
0
Backmerge: #1802 bad performance in WASM during the parsing of large sequences
#1860
even1024
closed
3 months ago
0
#1849 Macro(Import FASTA): The ' * ' symbol occurring between two letters is not recognized as a break in peptide chain
#1859
even1024
closed
3 months ago
0
#1850 Macro(Import FASTA): The '>' symbol is not recognized as indicating a new sequence
#1858
even1024
closed
3 months ago
0
Move all the logic from indigo_api.py to Indigo library
#1857
even1024
opened
3 months ago
0
rendering ketcher json format in Indigo python
#1856
registerme1963
opened
3 months ago
0
Atom Query feature export: System creates invalid mol file if custom query present - export to Mol file/RXN V2000/SDF V2000
#1855
AlexeyGirin
opened
3 months ago
1
Error "process is not defined" while try to open mol file after switching from Macro and Undo/Redo actions.
#1854
NadezhdaPeskun
closed
3 months ago
1
R groups from mol/Ket files of Macro mode are broken in the Micro mode.
#1853
NadezhdaPeskun
closed
3 months ago
1
Macro(Export FASTA): The header 'Sequence N' is missing, and '>' symbol is located at end of the first sequence
#1852
Zhirnoff
closed
3 months ago
2
Macro(Import FASTA): The ';' symbol is not recognized as a comment
#1851
Zhirnoff
closed
3 months ago
1
Macro(Import FASTA): The '>' symbol is not recognized as indicating a new sequence
#1850
Zhirnoff
closed
3 months ago
1
Macro(Import FASTA): The ' * ' symbol occurring between two letters is not recognized as a break in peptide chain
#1849
Zhirnoff
closed
3 months ago
1
Cannot save FASTA using the Remote mode
#1848
NadezhdaPeskun
closed
3 months ago
3
Backmerge: #1774 Save to CDX converts aromatic benzene ring to dashed ring
#1847
AliaksandrDziarkach
closed
3 months ago
0
#1774 Save to CDX converts aromatic benzene ring to dashed ring
#1846
AliaksandrDziarkach
closed
3 months ago
0
#1802 bad performance in WASM during the parsing of large sequences
#1845
even1024
closed
3 months ago
0
Implement GenBank/GenPept sequences import
#1844
even1024
closed
2 months ago
0
FASTA export: 80 chars limit
#1843
even1024
closed
2 months ago
1
Backmerge: #1773 Save to CDX converts plus and arrow into lone pair and line
#1842
AliaksandrDziarkach
closed
3 months ago
0
#1773 Save to CDX converts plus and arrow into lone pair and line
#1841
AliaksandrDziarkach
closed
3 months ago
0
FASTA: Add warning about lost some information (Phosphates) while we save DNA/RNA nucleotide to FASTA.
#1840
NadezhdaPeskun
closed
3 months ago
2
We cannot open usual FASTA file and switch to Micromolecules mode, Application hangs.
#1839
NadezhdaPeskun
closed
3 months ago
2
Adding Any Atom to the canvas make sulfur (S) valence equal 3 in aromatic ring
#1838
AlexeyGirin
opened
4 months ago
0
Remove hydrohens doen't work for Single Down bond
#1837
AlexeyGirin
opened
4 months ago
1
Add hydrogens removes ABS label for molecule with Single Down bond
#1836
AlexeyGirin
opened
4 months ago
2
Seven or eight valence atoms with Dative bonds in the ring cause performance degradation for Add/remove hydrogens operation
#1835
AlexeyGirin
opened
4 months ago
1
Add/Remove hydrogens cleans up valence value if its equal 8
#1834
AlexeyGirin
opened
4 months ago
0
Add/Remove hydrogens turns Sulfur with five valence into four valence and monoradical
#1833
AlexeyGirin
opened
4 months ago
0
Add/Remove hydrogens doesn't work for Dative and Hydrogen bonds with Ring Topology
#1832
AlexeyGirin
opened
4 months ago
0
How to get molecule from Inchikey
#1831
Surajpatil07
closed
4 months ago
4
Backmerge: #1796 Some bonds from ChemDraw don't display correctly in the Ketcher.
#1830
AliaksandrDziarkach
closed
3 months ago
0
#1796 Some bonds from ChemDraw don't display correctly in the Ketcher.
#1829
AliaksandrDziarkach
closed
3 months ago
0
Impossible open Fasta file with few Peptides or RNA or DNA sequences.
#1828
NadezhdaPeskun
closed
2 months ago
2
#1826 - Pagination and sorting for ElasticStream
#1827
uladkaminski
closed
3 months ago
1
Add sorting and pagination to bingo-elastic
#1826
khyurri
opened
4 months ago
3
Backmerge: #1814 Macro: System ignore spaces and line breaks when importing a sequence through Paste from Clipboard
#1825
even1024
closed
4 months ago
0
#1814 Macro: System ignore spaces and line breaks when importing a sequence through Paste from Clipboard
#1824
even1024
closed
4 months ago
0
Previous
Next